KEGG   Pseudomonas putida H8234: L483_10195
Entry
L483_10195        CDS       T02706                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pput  Pseudomonas putida H8234
Pathway
pput02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pput00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    L483_10195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pput03021]
    L483_10195
Transcription machinery [BR:pput03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     L483_10195
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_20 GerE HTH_24 HTH_38 DUF2774 HTH_28 HTH_11 DUF6031 HTH_7 TnsD
Other DBs
NCBI-ProteinID: AGN78735
LinkDB
Position
2193533..2194042
AA seq 169 aa
MSCADPSLQKAVHTLYEDHHAWLCGWLRRKLGCVEHAADLAQDTFMRVLTLRKAAELQQP
RAYLSSIARSLMIDMFRRRAVEQAYLETLAARPEPVEVSPEARLLIIETLLEIDRLLDGL
GSRTREIFLMAQLDGLSYVEIARRLDVSLTTVKKHAVRALTHCLMLAEA
NT seq 510 nt   +upstreamnt  +downstreamnt
atgtcctgtgctgacccttccctgcaaaaagccgtgcacacgctttacgaggaccaccat
gcctggttgtgcgggtggctgcgccgcaagctcgggtgtgtggagcatgcggccgacctg
gcccaggacacgttcatgcgggtactgaccctgcgcaaggcggccgagctgcaacagcca
cgggcttatctgagcagtattgcccgcagcctgatgatcgacatgtttcggcggcgtgcc
gtggagcaggcctacctggaaaccctcgcggcacggcctgagcctgtagaagtttcgccg
gaggcgcgcctgctgatcatcgagaccctgctggaaattgatcggctactcgacgggctg
ggctcgcgtacccgcgagatcttcctcatggcccagctcgatggcttgagctatgtggaa
attgcgcggcgcctggatgtttcgctcactactgtcaaaaagcatgcagtgcgggcgctg
acccattgcctgatgctggccgaggcctga

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