Pseudomonas putida H8234: L483_10195
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Entry
L483_10195 CDS
T02706
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pput
Pseudomonas putida H8234
Pathway
pput02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pput00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L483_10195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pput03021
]
L483_10195
Transcription machinery [BR:
pput03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L483_10195
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_20
GerE
HTH_24
HTH_38
DUF2774
HTH_28
HTH_11
DUF6031
HTH_7
TnsD
Motif
Other DBs
NCBI-ProteinID:
AGN78735
LinkDB
All DBs
Position
2193533..2194042
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AA seq
169 aa
AA seq
DB search
MSCADPSLQKAVHTLYEDHHAWLCGWLRRKLGCVEHAADLAQDTFMRVLTLRKAAELQQP
RAYLSSIARSLMIDMFRRRAVEQAYLETLAARPEPVEVSPEARLLIIETLLEIDRLLDGL
GSRTREIFLMAQLDGLSYVEIARRLDVSLTTVKKHAVRALTHCLMLAEA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgctgacccttccctgcaaaaagccgtgcacacgctttacgaggaccaccat
gcctggttgtgcgggtggctgcgccgcaagctcgggtgtgtggagcatgcggccgacctg
gcccaggacacgttcatgcgggtactgaccctgcgcaaggcggccgagctgcaacagcca
cgggcttatctgagcagtattgcccgcagcctgatgatcgacatgtttcggcggcgtgcc
gtggagcaggcctacctggaaaccctcgcggcacggcctgagcctgtagaagtttcgccg
gaggcgcgcctgctgatcatcgagaccctgctggaaattgatcggctactcgacgggctg
ggctcgcgtacccgcgagatcttcctcatggcccagctcgatggcttgagctatgtggaa
attgcgcggcgcctggatgtttcgctcactactgtcaaaaagcatgcagtgcgggcgctg
acccattgcctgatgctggccgaggcctga
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