KEGG   Pseudomonas putida H8234: L483_11605
Entry
L483_11605        CDS       T02706                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pput  Pseudomonas putida H8234
Pathway
pput02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pput00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    L483_11605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pput03021]
    L483_11605
Transcription machinery [BR:pput03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     L483_11605
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Sigma70_ECF PhyR_sigma-like HTH_Tnp_4 HTH_31 HTH_24 HTH_11 HTH_3 HTH_40 HTH_7 PCI Fe_dep_repress
Other DBs
NCBI-ProteinID: AGN78856
LinkDB
Position
complement(2505846..2506352)
AA seq 168 aa
MPIDAPLQPIDSLYRDHHGWLQGWLRHRLGDRERAADIAQDTFLRLLVTRRLPEQRDGRR
FLVQIARNLVIDQWRRQRIHQAYLESIAALPEPETPSLETRAIVIETLMQIDAMLDKMPA
KVREAFLLSQFEGLTYTQIAARLDVSVSSVQKYMLRAITACYQVLYAE
NT seq 507 nt   +upstreamnt  +downstreamnt
gtgcccatcgacgccccactgcaacccatcgacagcctgtatcgcgaccaccacggctgg
ctgcaaggctggctgcgccaccgcctgggtgatcgcgagcgggcggcggacatcgctcag
gacactttcctgcgcctgctggtaacccgccgcctgccggaacagcgcgacggccgtcga
ttcctggtgcagatcgcccgcaatctggtcatagaccagtggcgtcgccagcgtatccac
caagcgtatctggagagcatcgccgccctgcccgagccagaaacgccgtcactggaaacc
cgcgcgatcgtgatcgaaaccctgatgcagatcgacgccatgctcgacaagatgcctgca
aaggtacgcgaggcattcctgctgtcgcaatttgaagggctgacctacacacagatcgca
gcgcggctggacgtcagcgtcagctcggtgcaaaagtacatgctccgcgccatcactgcc
tgctatcaggtcctgtacgctgaatga

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