Pseudomonas putida H8234: L483_11605
Help
Entry
L483_11605 CDS
T02706
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pput
Pseudomonas putida H8234
Pathway
pput02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pput00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L483_11605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pput03021
]
L483_11605
Transcription machinery [BR:
pput03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L483_11605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
PhyR_sigma-like
HTH_Tnp_4
HTH_31
HTH_24
HTH_11
HTH_3
HTH_40
HTH_7
PCI
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
AGN78856
LinkDB
All DBs
Position
complement(2505846..2506352)
Genome browser
AA seq
168 aa
AA seq
DB search
MPIDAPLQPIDSLYRDHHGWLQGWLRHRLGDRERAADIAQDTFLRLLVTRRLPEQRDGRR
FLVQIARNLVIDQWRRQRIHQAYLESIAALPEPETPSLETRAIVIETLMQIDAMLDKMPA
KVREAFLLSQFEGLTYTQIAARLDVSVSSVQKYMLRAITACYQVLYAE
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
gtgcccatcgacgccccactgcaacccatcgacagcctgtatcgcgaccaccacggctgg
ctgcaaggctggctgcgccaccgcctgggtgatcgcgagcgggcggcggacatcgctcag
gacactttcctgcgcctgctggtaacccgccgcctgccggaacagcgcgacggccgtcga
ttcctggtgcagatcgcccgcaatctggtcatagaccagtggcgtcgccagcgtatccac
caagcgtatctggagagcatcgccgccctgcccgagccagaaacgccgtcactggaaacc
cgcgcgatcgtgatcgaaaccctgatgcagatcgacgccatgctcgacaagatgcctgca
aaggtacgcgaggcattcctgctgtcgcaatttgaagggctgacctacacacagatcgca
gcgcggctggacgtcagcgtcagctcggtgcaaaagtacatgctccgcgccatcactgcc
tgctatcaggtcctgtacgctgaatga
DBGET
integrated database retrieval system