Pseudomonas putida H8234: L483_12115
Help
Entry
L483_12115 CDS
T02706
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pput
Pseudomonas putida H8234
Pathway
pput03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pput00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
L483_12115
09124 Replication and repair
03420 Nucleotide excision repair
L483_12115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pput03021
]
L483_12115
03036 Chromosome and associated proteins [BR:
pput03036
]
L483_12115
03400 DNA repair and recombination proteins [BR:
pput03400
]
L483_12115
Enzymes [BR:
pput01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
L483_12115
Transcription machinery [BR:
pput03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
L483_12115
Chromosome and associated proteins [BR:
pput03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
L483_12115
DNA repair and recombination proteins [BR:
pput03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
L483_12115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Helicase_C
DUF7711
Motif
Other DBs
NCBI-ProteinID:
AGN78877
LinkDB
All DBs
Position
2606892..2609195
Genome browser
AA seq
767 aa
AA seq
DB search
MSYSIAVRALCEFSAKVGDLDLRFTPSPSAQEGIEGHQRVVARRAAGYESEITLEGQFET
LKVRGRADGYDPGSNRLEEIKTHRGDLARQPANHRQLHWAQAKVYGWLMCQARQLSAIEV
ALVYLDVDSDEQTLFSEHYESAELRAFFETQCQRFLGWAQFQQRRLAERDQGLQALRFPY
PQFRQGQRQLAETLYKAVSTGRCLMAQASTGIGKTLGTLFPLLKAMVPQQLDKLFFLTAK
TPGRALALDAMRQITDAAPQPALRTLELIARDKACEYLDKACHGESCPLAAGFYDRLPAA
REAAATLPLLDRANLREVALAHQVCPYYLGQEMARWVDVLVADYNYYFDAHALLFGLTQL
NQWRVAVLVDEAHNLVERGRGMYSASLDQGQLLALRQRKPPGLVSALDRLNRQWNALYKE
QRAPYQASESLPDGLLRALQQCIGQIQEQMNQMPAHMDPQVLQFFYQALQFSRVAELFDE
HFLFDISQRQGPRKRRLATLCLRNVTPARLLAPRMLAARSVTLFSATLSPRHFYSDLLGM
PADTAWLEVAAPFRAEQLEVRIASQVSTRYQQRQASLVPIVELIAQQYEHMPGNYLAFFS
SFEYLQQVADLLAERHGQIPLWAQAPGMDEAARQAFLDRFVADGRGVGFAVLGGAFGEGV
DLPGTRLIGAFVATLGLPQVNPVNEQFKQRLGRQFGAGFDYTYLYPGVRKVIQAAGRVIR
GDQDRGVLVLIDERFAEPRVQQMFPAWWPKAAPASTPADDKSTLRLR
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgagctacagcattgcggtgcgtgctctgtgcgagttcagcgccaaggttggtgacctg
gacctgcgtttcacgccgtcgcccagcgctcaggaaggcatcgaagggcatcagcgggta
gtggcacggagggctgcgggctacgagtcggaaatcacccttgaaggccaattcgaaacc
ctcaaggtgcggggccgcgccgacggttacgaccctggcagcaaccgcctggaagagatc
aagacgcaccgtggcgacttggcgcgtcaacccgccaatcaccgtcagttgcactgggca
caggccaaggtctatggctggttgatgtgccaggcacgacaactgtccgccattgaggtg
gcgctggtgtacctggacgtggacagcgatgagcagacactgttcagtgagcactatgag
tccgctgaattgcgggccttcttcgaaacccagtgccagcgctttctaggctgggcccaa
ttccagcaacgacgcctggccgaacgtgaccaaggccttcaggcgctgcgcttcccctac
ccacagtttcgccagggccagcggcagctggccgaaaccttgtacaaggcggtaagcacc
gggcgttgcctgatggcccaggccagcaccggcattggcaagacccttggtacgttgttc
ccgctgctgaaagccatggtgccgcagcagctggacaagctgttctttctcaccgccaag
acgccgggccgggcgctggcccttgatgccatgcgtcagatcactgatgctgcgccacaa
cctgctttgcgcacactggagttgattgcccgcgacaaggcctgcgagtacctggacaaa
gcctgtcatggcgagtcctgcccattggccgctggcttctacgaccgcttgccggcagcg
cgtgaggccgccgcaacactgccgttgctcgaccgtgccaacctgcgcgaagtggccttg
gcgcaccaggtttgcccgtattacctggggcaggagatggcgcgctgggtcgacgtgctg
gtcgccgactacaactactactttgatgcgcatgccttgctgttcggcctgacccagctc
aaccagtggcgcgttgcggtgctggttgacgaagcgcataacctggtcgagcgtggtcgt
ggcatgtacagcgccagccttgaccaagggcagctgctggccctgcgtcagcgcaaaccg
cccgggctggtcagcgcccttgaccgcctgaaccggcagtggaatgcgctgtacaaagaa
cagcgtgcgccgtaccaggccagcgagtcgctgcccgacgggttgttgcgcgccttgcag
cagtgcatcggccagattcaggagcagatgaatcagatgcccgcgcacatggacccgcag
gtattgcagtttttctatcaggccttgcagttcagccgggttgccgagctgttcgatgaa
cacttcctgttcgacatcagccagcgccagggcccgcgcaagcgccggctggctaccctg
tgcctgcgcaatgtcaccccggcgcgcctgttggccccacgcatgctggcggcgcgcagt
gtgacgctgttttccgccacgttgagcccgcggcatttctacagcgacttgctgggtatg
ccggccgataccgcctggctagaagtggctgcgccgtttcgcgcagagcagctggaggta
cggattgccagccaggtgtccacccgctaccagcagcggcaagcctctctggtaccgatc
gtggagctgattgcccagcagtatgagcacatgccgggtaactacctggcattcttcagc
agcttcgaatacctgcagcaggtggccgacctgttggccgagcggcatgggcagattccc
ctgtgggcccaggccccggggatggacgaggccgcccgccaggcgtttcttgatcgattt
gttgccgacggccggggcgttggctttgccgtattggggggggctttcggcgaaggcgtg
gatttaccaggtacgcggctgatcggggcgtttgtcgccaccttggggttgccgcaggtc
aacccggtcaacgagcagttcaagcaacgcctgggtcggcaatttggtgcgggttttgac
tacacctatctttacccgggtgtgcgcaaagtgatccaggcggctggccgggttatccgt
ggagaccaggaccggggcgtgctggtgctgatagatgaacgcttcgccgagccccgggtg
cagcagatgtttccggcatggtggcccaaggctgcgccggccagcacgccggctgatgac
aaaagcacgctccgattgcggtaa
DBGET
integrated database retrieval system
