Pseudomonas putida H8234: L483_13510
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Entry
L483_13510 CDS
T02706
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pput
Pseudomonas putida H8234
Pathway
pput02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pput00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L483_13510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pput03021
]
L483_13510
Transcription machinery [BR:
pput03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L483_13510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
HTH_23
Sigma70_r4
RovC_DNA-bd
HTH_28
TnsD
HTH_10
HTH_29
DUF2774
HTH_Tnp_4
HTH_36
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AGN78996
LinkDB
All DBs
Position
complement(2875138..2875668)
Genome browser
AA seq
176 aa
AA seq
DB search
MPDSLPSTGHSLAGLYANHHGWLVNWLRGRLQCSQQAADLAQDTFVRVLLADRSQPLLSE
LREPRHFLVTMARRVMIDSFRRRALEQAYLQLLAEQPEQYAISPEERWMLVETLQALDAM
LEGLGKKVKQAFLLSQLRGLGYKDIAVQMGVSVSSVTKYIARATEHCLLFALEHAQ
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactccctcccctcgaccggacacagcctggccggcctgtacgccaaccaccat
ggctggctggtgaactggctgcgtggccgcctgcagtgttcgcagcaggccgccgacctg
gcccaggacacgttcgtgcgtgtactgctggccgaccgcagccagcctttgctcagtgaa
ctgcgcgagccacgccactttctggtcaccatggccaggcgcgtgatgattgacagcttc
cgccgccgggcactggagcaggcctacctgcaactgttggccgaacagcccgaacagtat
gcgatttcccccgaggaacgctggatgctggtagaaaccctgcaagcactggatgcgatg
cttgaaggcctgggcaagaaggtcaagcaggcgtttctgttatcgcagttgcgtggcctg
ggctacaaggacatcgccgtccagatgggcgtatcagtcagttcggtcaccaagtacatt
gcccgcgccaccgagcactgcttgctgtttgccctggaacacgcccagtga
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integrated database retrieval system
