KEGG   Pseudomonas putida H8234: L483_16860
Entry
L483_16860        CDS       T02706                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pput  Pseudomonas putida H8234
Brite
KEGG Orthology (KO) [BR:pput00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pput03400]
    L483_16860
Enzymes [BR:pput01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     L483_16860
    5.6.2.6  RNA 3'-5' helicase
     L483_16860
DNA repair and recombination proteins [BR:pput03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    L483_16860
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AGN82557
LinkDB
Position
complement(3549591..3551705)
AA seq 704 aa
MVGADRDVIIAASTAAGKTEAAFLPILTNLLNDREPAGAVLYISPLKALINDQWDRLSRL
CERLELPVVAWHGDVAASKKQRFLKSPEGILLITPESLEALFVNRGSSLPGAFQNLRYIV
IDELHAFIGSERGKQLQSLMERVEIVVGRALPRVGLSATLGEMSLARKFLRPVRPDDITI
IESKSSNQELQVQVRGYLEQPMQQVVAEYPGKSSTDEGDEQEETSGTKVAIAGHLYKVLR
GHNNLIFPNRRQEVEWFADRLRSLCDNDGVPNEFWPHHGSLSKELRQDAERALKAGDPPA
SAVCTTTLELGIDIGNIRTVAQIGSPPSVASLRQRLGRSGRRPGEPAMLRAYCRERPLTD
QSDLSDQLREGLVQTVAMIRLLIGGWFEPPRSGGLHASTLVQQCLSSIAQLGGASAAQLW
GNLIASGSFASVTKPDFLSLLKGMGEKELIVQDSSGLLLPGELGERLINHYEFYTAFTSD
EEFRLLRDGKPLGSLPVSKPLTKGQRIIFGGRRWQVQSVDLEAKMIVVTPARGGEPPQFD
GLGAQVDDRVRLEMRNVLMETTPCPFLDKHAQVLLEEARSNFRALGLGSTAIVGSASVSY
VATWRGDYTNDALALLLRHVGIHCENTGLFLEVAFSEEDTLRALRVVGQMDISNVEPILE
SVENMIREKWDWALPRSLLMKSFASSHLDLQAAVLTARLLGEEA
NT seq 2115 nt   +upstreamnt  +downstreamnt
ttggtgggcgctgatcgcgatgtgatcattgcagcgtctaccgcagcaggcaaaacggag
gccgcattcctccctatcctgaccaacctgctcaacgaccgcgagcccgccggcgcagtg
ctatatatcagcccactcaaggcactgatcaatgaccaatgggacaggctcagccggctg
tgcgagcggctagagctccccgtcgttgcctggcatggtgatgtggcagcaagcaagaaa
caacggttcctgaaatcgcctgagggcatcttgctgatcacgccggagtccctcgaagcc
ctcttcgtaaacaggggctcaagtttgcccggggcttttcagaacctgcgctacatcgtc
atcgatgagcttcatgccttcattggcagtgagcgcggtaagcaactgcaatcgctcatg
gaacgggttgagatcgtcgtaggcagggcgctgcctcgcgtaggactttccgcgacgctt
ggggagatgtcgctggcccggaagtttctgaggccggttcgcccggatgacatcaccatc
attgagtcgaaatcctctaaccaagaactccaggtgcaagtccgcggctaccttgaacag
ccgatgcaacaggtggtggcggaataccctgggaaatcgtcaacagatgaaggcgacgaa
caggaggagacctctggcaccaaggtggcaattgcaggccatctgtacaaggtgctgaga
gggcacaacaacctgatcttccccaacaggcgccaagaggttgaatggtttgccgaccga
ctgcgctcactgtgcgataacgatggcgtgccaaacgagttctggccgcaccacggtagc
ttgtccaaggaactgcgccaggatgccgagcgcgcgttgaaggcgggagatcctcctgct
tctgccgtatgcactactaccttggagctgggtatcgacatcggtaacatccggacggtc
gcacagatcggttccccaccctctgtggcaagtctcaggcaacggcttggccgctcgggt
cgtcgacccggtgagcctgcaatgctcagggcgtactgccgagagcgccccttaacggat
cagtctgatctctccgatcagttgcgtgagggccttgtccaaacggtcgctatgatccgc
ttgctgatcggtggatggtttgaaccacctcggtcgggaggcttgcacgcctcgacactg
gtgcagcagtgcttgtcgtcaattgctcagctcggcggtgcctcggcagcgcaattatgg
ggaaatctcatagcaagcggcagttttgcgagcgtcaccaagcctgattttctgtctttg
ctgaaaggtatgggtgagaaagagctgatcgtccaggacagctcaggacttctgctgcca
ggcgaactcggggagcgattgatcaaccattatgagttctacactgcattcacgagcgat
gaagagtttcgtttactcagggatggcaagccacttggctcgctgcccgtcagcaaaccc
ctgaccaaggggcaacgcatcattttcggcggcagacgttggcaggttcagagtgtcgac
ctggaagcgaagatgatcgtagtcacgccggcgcggggcggcgagccccctcagtttgat
gggctaggtgcgcaggtggatgatcgcgtcaggcttgaaatgcgaaacgtgctgatggaa
accaccccctgtcctttcctggacaagcacgctcaagtccttctggaggaggctcggagt
aacttccgtgccctcggattgggtagcacggcaattgttggctccgccagtgtcagctac
gtggcgacctggcgaggggactacaccaacgatgcgctggccttgctgctccggcatgtg
ggcattcactgtgaaaacacagggctcttcctggaagttgcattcagtgaagaggatacg
ttgcgagcgttgcgcgtggtcggtcaaatggatatttcaaatgtagagcccatcttggag
agcgtagaaaacatgatccgagagaaatgggattgggcccttccccgctcgctcctaatg
aagtcatttgcctcgagccatcttgatctccaggccgcggttttaacagcacgacttctt
ggcgaagaggcgtag

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