KEGG   Pseudomonas putida H8234: L483_24025
Entry
L483_24025        CDS       T02706                                 
Name
(GenBank) RNA polymerase sigma 70
  KO
K02405  RNA polymerase sigma factor FliA
Organism
pput  Pseudomonas putida H8234
Pathway
pput02020  Two-component system
pput02025  Biofilm formation - Pseudomonas aeruginosa
pput02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pput00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    L483_24025
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    L483_24025
  09142 Cell motility
   02040 Flagellar assembly
    L483_24025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pput03021]
    L483_24025
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:pput02035]
    L483_24025
Transcription machinery [BR:pput03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     L483_24025
Bacterial motility proteins [BR:pput02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    L483_24025
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 UPF0122 HTH_30 GerE MarR_2 Glyco_tranf_2_4 Rv2175c_wHTH
Other DBs
NCBI-ProteinID: AGN79964
LinkDB
Position
complement(5084567..5085307)
AA seq 246 aa
MNASGFKMYSRAAKDGQYELIERYAPLVKRIAYHLLARLPANVQVEDLIQAGMIGLLEVA
NKYDASKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAMRAVEARTGRDAK
DHEVAAELQLSLDDYYGILNDTLGSRLFSFDDLLQDGEHEGLHEDGASGHVEPARGLEDE
RFQAALTEAIANLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRSRL
GEWRAR
NT seq 741 nt   +upstreamnt  +downstreamnt
atgaatgccagcggcttcaagatgtacagccgggcagcgaaagacggccagtacgagctg
atcgaacgctacgccccgctggtgaagcgcattgcctaccacctgttggcgcggttgccg
gccaacgtgcaggtcgaggacctgatccaggccggcatgatcggcctgcttgaagtggcc
aacaagtatgacgccagcaaaggcgccagctttgaaacctatgccggcatccgcatccgc
ggggccatgctggacgaggtgcgcaagggcgactgggcgccgcgttcggtgcaccgcaac
acccgcatggtcagtgacgcgatgcgtgccgttgaagccagaaccggccgagacgctaaa
gatcatgaagttgctgccgaactccagttgagtctcgatgattactacgggatcttgaac
gataccttgggcagccgcctgttcagctttgacgacctgttgcaggacggcgagcacgaa
gggctgcatgaggatggcgccagtggccacgtcgaacctgcacgtggccttgaggacgaa
cgcttccaggctgccctgaccgaggccattgccaacctgccggagcgtgagcgcctggta
ttggcgctgtactacgacgaagagctgaacctcaaggaaatcggcgaggtgcttggggtc
agcgaatcacgggtcagccagttgcacagccaatgtgccgcgcgcctgcgtagccgcctg
ggggaatggcgggcacgttga

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