Pseudomonas putida H8234: L483_27885
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Entry
L483_27885 CDS
T02706
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pput
Pseudomonas putida H8234
Pathway
pput03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pput00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L483_27885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pput03400
]
L483_27885
Enzymes [BR:
pput01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
L483_27885
DNA repair and recombination proteins [BR:
pput03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L483_27885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
AAA_11
UvrD_C_2
Helicase_RecD
AAA_22
SH3_13
Viral_helicase1
UvrD-helicase
AAA_16
SLFN-g3_helicase
TraI_hel_assoc_N
AAA_28
AAA_17
T2SSE
nSTAND3
NTPase_1
PhoH
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AGN80570
LinkDB
All DBs
Position
complement(5901581..5903668)
Genome browser
AA seq
695 aa
AA seq
DB search
MSRAKSRNLVDLLPTPLHAEHLLALAPQHDSGDLLQLLDRWVERGWLRALDRAFVSFLEE
RAPGSDPLLLLAAALASHQLGHGHVCLDLQQTLAEPDFALSLPPEGDALIGPLLLPSQLL
ADLGLKDWRQRIAASALVAAGDTPGQQARPLVLSGERLYLRRYWRYERRIDQILRQRLTQ
AEAPLADLSGRLSQLFEGGAPAGQVDWQKLACALATRAGFSIITGGPGTGKTTTVVRLLA
LLQGPAVEQGRPLRIRLAAPTGKAAARLTESIGQQVERLQVSAEVRDQIPTEVSTVHRLL
GSRPGSRHFRHHAGNPLPLDVLVVDEASMIDLEMMANLLDALPPRARLVLLGDKDQLASV
EAGAVLGDLCRDAEGGHYSSATSAWLEQISGESLAASGLKAGDEQRNPLAQQLVMLRFSR
RFGEGSGIGQLARLVNCQDSHAARNLLATPPADVHSLALKHEQDRAFDRLLLDGLNRGAE
GPQGYRSYLRTLGRYRPALETAFDDPAWEQWAGKVLHSFEDFQLLCAVRRGAWGVEGLNE
RVARVLHAAGLIDSQQPWYEGRPVLVTRNDYGLGLMNGDIGIALRLPDERGEPLLRVAFP
RNDGSGGVRFVLPSRLNEVETVFAMTVHKSQGSEFSHTALVLPDALNPVLTKELVYTGIT
RAKHCFSLVEPRQGIFEEAVARKVRRISGLMLEQV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgccaagagccgaaacctggtcgacctgttgcccaccccgttgcacgccgaa
cacctgctggcgctggcgccacagcatgacagcggtgacctgctgcaactgctcgaccgc
tgggtagagcggggctggctgcgtgccctggaccgcgcgttcgtctcgttcctcgaagag
cgcgcccccggtagcgaccccttgctattgctggcggcggcgctggccagccaccaactg
ggccacgggcatgtctgcctggacctgcaacaaaccctggccgagcccgattttgcattg
tcactgccgccggaaggcgacgccttgataggccccttgctgctgccctcgcagttgctg
gccgacctcggtttgaaggactggcgccaacgcatcgccgccagcgcgctggtggctgcc
ggcgataccccggggcagcaggcgcggccactggtgctcagcggtgagcgcctgtacctg
cgccgctactggcgctacgagcggcgcatcgaccagatcctgcgccagcgcctgacccag
gccgaggcgccgctggccgatctgtcaggtcgcctgtcgcaactgttcgaagggggagcg
ccagctggccaggtggactggcagaagcttgcctgtgcgctggcaacccgtgccggtttc
agcatcatcaccggtggccccggcacaggcaaaaccactaccgtggtgcgcctgctggcc
ttgctgcaggggccggcagtggagcagggcaggccgctgcgcatccgcttggccgcgccg
accggcaaggctgctgcgcgcctgacggagtcgattggccagcaagtcgagcgcttgcag
gtcagcgccgaagtacgtgatcagatccccactgaagtcagcactgtgcaccgtctgctc
ggcagccgccccggctcgcggcactttcgccaccatgcaggcaaccccttgccgctggac
gtgctggtggtcgatgaagcgtcgatgatcgacctggaaatgatggctaacctgctcgac
gccctgccaccccgcgcgcgcctggtgctgctgggcgacaaggaccagctggcttcggtc
gaggccggtgcggtgctgggcgacctgtgccgggatgccgaggggggccactattcgtcg
gcgacctctgcgtggctggaacagatcagcggtgagtcgctggccgccagcggcctgaag
gccggtgatgagcagcgcaacccgctggcccagcaattggtgatgctgcgcttctcacgg
cgcttcggggaaggcagcggtattggtcaactggcgcggctggtcaactgccaggactcc
catgcggcgcgcaacctgctggccacgccgccggccgatgtgcacagccttgccctcaag
cacgagcaggaccgggctttcgaccgcctgctactcgacggcctgaaccgcggtgccgaa
ggcccgcaaggctatcgcagctacctgcgcacacttggccgctaccggcctgcactcgaa
actgcatttgacgaccccgcgtgggagcaatgggcgggcaaggtgctgcacagcttcgag
gacttccagttgctgtgcgcggtgcgtcgtggcgcctggggtgtcgaaggcctcaacgaa
cgggtggcgcgggtgctgcacgctgccgggctgatcgatagccagcagccctggtacgaa
ggccgtccggtgctggtgacccgcaacgactacgggctggggctgatgaacggcgacatc
ggtatcgccctgcgcctgccggacgagcgtggtgagccgctgctgcgggtggccttcccg
cgtaatgacggcagtggtggtgtgcgtttcgtgctgccgagccggctcaatgaagtggaa
acggtattcgccatgaccgtgcacaagtcccagggctcggagttcagccacaccgccctg
gtgctgccggatgcgctcaacccggtgctgaccaaggaactggtgtacaccggcatcacc
cgggccaagcactgcttcagcctggtcgagccacgccagggcattttcgaagaagcggtg
gcgcgcaaggtgcggcgtatttccgggttgatgctcgaacaggtgtaa
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