Pseudomonas putida H8234: L483_28105
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Entry
L483_28105 CDS
T02706
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pput
Pseudomonas putida H8234
Brite
KEGG Orthology (KO) [BR:
pput00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pput03016
]
L483_28105
Enzymes [BR:
pput01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
L483_28105
Transfer RNA biogenesis [BR:
pput03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L483_28105
Prokaryotic type
L483_28105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
HTH_CodY
Motif
Other DBs
NCBI-ProteinID:
AGN80605
LinkDB
All DBs
Position
complement(5958498..5959415)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETVMQMGQTTNTGDAEGEVLQTREVTVGRADIEAVLPRFRGPIS
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTINRLELLECEGTRARLSVGCSKGTYI
RTLVEDIGEALGCGAYVAELRRTQAGPFALAQTVTLEALEQAHAEGGNEALDRFLMPSDS
GLQDWPMVCLSEHSAFYWLHGQAVRAPDAPQFGMVRVQDHNARFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtcaaacgtatccgccgcaatgtcagcggcatcatcctgctcgacaagcct
ttgggctttacgtccaacgccgccctgcaaaaggtgcgctggctgctcaacgcggaaaag
gccggccatactggcagcctcgacccgctggcaaccggcgtgctgccactgtgctttggc
gaggcgaccaagttttcgcagtacctgctcgattccgacaagggctacgaaaccgtcatg
cagatggggcagactaccaacaccggcgatgccgaaggtgaggtgctgcagacccgcgag
gtgaccgttggtcgtgccgacatcgaggcagtactgccacgatttcgtggccctatcagc
cagataccgccgatgtactcggcgctcaagcgtgacggccagccactttacaagctggca
cgtgcaggagaggtagtggagcgcgaggcgcgttctgttactattaaccgcttggagttg
ctggagtgtgaaggcacccgtgcacggctgagcgtaggatgcagcaaaggcacctatatc
cgcaccctggtggaggatatcggcgaggcccttggttgcggcgcctatgtcgccgaactg
cgcaggacccaggccgggccctttgcgctggcacagacggtcacgctcgaagcgctcgaa
caggcccatgccgaaggtggcaacgaagcgctcgatcgcttcctgatgccctcggacagc
ggtctgcaggactggcccatggtgtgcctgtccgagcacagtgcgttctactggctgcat
gggcaggcagtacgcgcgcccgacgcgccacagtttggcatggtccgggtacaggatcac
aatgcgcgcttcatcggtatcggtgaagtgagcgaagacgggcgtattgcgccgcgtcgg
ctgattcggtcggaatga
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