Pseudomonas putida H8234: L483_29660
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Entry
L483_29660 CDS
T02706
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pput
Pseudomonas putida H8234
Pathway
pput03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pput00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
L483_29660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pput03019
]
L483_29660
03009 Ribosome biogenesis [BR:
pput03009
]
L483_29660
Messenger RNA biogenesis [BR:
pput03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L483_29660
Ribosome biogenesis [BR:
pput03009
]
Eukaryotic type
Pre-60S particles
RNases
L483_29660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AGN80788
LinkDB
All DBs
Position
complement(6258158..6258700)
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AA seq
180 aa
AA seq
DB search
MQNPQNLIWIDLEMTGLDPDSDVIIEMATIVTDSELNTLAEGPVIAIHHSDEVLARMDEW
NTRTHGASGLTQRVRESKLSMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMR
NLENYFHYRNLDVSTLKELAARWAPGVRDSFKKGNTHLALDDIRESIAELRHYREHFIKL
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccacagaacctgatctggatcgacctggaaatgaccggcctggatccggac
agtgatgtcatcatcgagatggccaccatcgttaccgacagcgagctgaacaccctggct
gaagggccggtgatcgccatccatcacagtgacgaagtgctggcgcgcatggacgaatgg
aacacccgtacccacggtgcttcgggcctgacccagcgcgtgcgcgagagcaagctcagc
atggcagaagccgaagcgcagaccatcgccttcctcgagcagtgggtgcccaaaggcaag
tcgccgatctgcggcaacagcatctgccaggaccgccgcttcctctatcgccacatgcgc
aacctggaaaactacttccactaccgcaacctggatgtctccaccctgaaggaattggcc
gcgcgctgggcgccgggcgtgcgtgacagcttcaagaagggcaacacccatttggcgctg
gacgatatccgcgaatcgatcgccgagctgcgtcactaccgcgagcacttcatcaaactg
tga
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