Pseudomonas putida H8234: L483_31320
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Entry
L483_31320 CDS
T02706
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pput
Pseudomonas putida H8234
Pathway
pput00300
Lysine biosynthesis
pput00470
D-Amino acid metabolism
pput01100
Metabolic pathways
pput01110
Biosynthesis of secondary metabolites
pput01120
Microbial metabolism in diverse environments
pput01230
Biosynthesis of amino acids
Module
pput_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pput00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
L483_31320 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
L483_31320 (dapF)
Enzymes [BR:
pput01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
L483_31320 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
SPO11_like
Motif
Other DBs
NCBI-ProteinID:
AGN81088
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Position
6641587..6642417
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGIGFDQLLIVEAPNNPEVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKKRIRVETKSGIIVLDVQNDGQVSVDM
GPPRFIPADIPFVADEQALNYPLEVDGQLHSIAAVSMGNPHAVLRVDDVHTAPVHELGPK
IENHPRFPQRVNAGFLQVIDRHRANLRVWERGAGETQACGTGACAAAVAAISQGWMDSPV
SLDLPGGRLHIEWAGPGKPVVMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcatggcctgggcaacgacttcatggtcctcgacctg
gtcagccagcacgcgcatatccagcccaagcacgccaagcaatggggtgaccggcatacc
ggcatcggcttcgaccagttgctgatcgtcgaggccccgaacaacccggaagtggacttc
cgctaccgcatcttcaacgccgacggctccgaagtggagcagtgcggcaacggtgcgcgc
tgcttcgcccgcttcgtgctggacaagcgcctgaccgcgaaaaagcgcatccgcgtggaa
accaaaagcggcatcatcgtgctggacgtgcagaacgacggccaggtgagtgtcgacatg
ggcccaccgcgcttcatccctgccgacattccctttgtcgctgacgagcaggcgctgaac
tacccactggaagtcgacggccagctgcattcgattgccgccgtgtccatgggtaacccg
catgccgtgctgcgcgtcgatgacgtgcatactgcccccgtgcatgagctgggcccgaag
atcgaaaaccacccacgcttcccgcagcgggtgaatgccggcttcctccaggtcatcgac
cgccaccgcgccaacctgcgcgtgtgggaacgcggcgcgggcgaaacccaggcctgcggc
accggtgcttgtgccgccgccgtggcagccatcagccaaggctggatggattccccggta
tccctcgacctgcccggtgggcgcctgcacatcgaatgggccggccccggcaagcccgtg
gtgatgaccggcccggccgtacgcgtctacgaaggacaggttcgtctctaa
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