KEGG   Pseudomonas putida H8234: L483_31320
Entry
L483_31320        CDS       T02706                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pput  Pseudomonas putida H8234
Pathway
pput00300  Lysine biosynthesis
pput00470  D-Amino acid metabolism
pput01100  Metabolic pathways
pput01110  Biosynthesis of secondary metabolites
pput01120  Microbial metabolism in diverse environments
pput01230  Biosynthesis of amino acids
Module
pput_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pput00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    L483_31320 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    L483_31320 (dapF)
Enzymes [BR:pput01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     L483_31320 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF SPO11_like
Other DBs
NCBI-ProteinID: AGN81088
LinkDB
Position
6641587..6642417
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGIGFDQLLIVEAPNNPEVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKKRIRVETKSGIIVLDVQNDGQVSVDM
GPPRFIPADIPFVADEQALNYPLEVDGQLHSIAAVSMGNPHAVLRVDDVHTAPVHELGPK
IENHPRFPQRVNAGFLQVIDRHRANLRVWERGAGETQACGTGACAAAVAAISQGWMDSPV
SLDLPGGRLHIEWAGPGKPVVMTGPAVRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctgctgcgttttaccaagatgcatggcctgggcaacgacttcatggtcctcgacctg
gtcagccagcacgcgcatatccagcccaagcacgccaagcaatggggtgaccggcatacc
ggcatcggcttcgaccagttgctgatcgtcgaggccccgaacaacccggaagtggacttc
cgctaccgcatcttcaacgccgacggctccgaagtggagcagtgcggcaacggtgcgcgc
tgcttcgcccgcttcgtgctggacaagcgcctgaccgcgaaaaagcgcatccgcgtggaa
accaaaagcggcatcatcgtgctggacgtgcagaacgacggccaggtgagtgtcgacatg
ggcccaccgcgcttcatccctgccgacattccctttgtcgctgacgagcaggcgctgaac
tacccactggaagtcgacggccagctgcattcgattgccgccgtgtccatgggtaacccg
catgccgtgctgcgcgtcgatgacgtgcatactgcccccgtgcatgagctgggcccgaag
atcgaaaaccacccacgcttcccgcagcgggtgaatgccggcttcctccaggtcatcgac
cgccaccgcgccaacctgcgcgtgtgggaacgcggcgcgggcgaaacccaggcctgcggc
accggtgcttgtgccgccgccgtggcagccatcagccaaggctggatggattccccggta
tccctcgacctgcccggtgggcgcctgcacatcgaatgggccggccccggcaagcccgtg
gtgatgaccggcccggccgtacgcgtctacgaaggacaggttcgtctctaa

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