Pseudomonas putida H8234: L483_31895
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Entry
L483_31895 CDS
T02706
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pput
Pseudomonas putida H8234
Pathway
pput03420
Nucleotide excision repair
pput03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pput00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L483_31895 (uvrD)
03430 Mismatch repair
L483_31895 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pput03400
]
L483_31895 (uvrD)
Enzymes [BR:
pput01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L483_31895 (uvrD)
DNA repair and recombination proteins [BR:
pput03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L483_31895 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
L483_31895 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
AAA_22
Viral_helicase1
DUF5681
Motif
Other DBs
NCBI-ProteinID:
AGN81184
LinkDB
All DBs
Position
6765260..6767446
Genome browser
AA seq
728 aa
AA seq
DB search
MHTDDLSLLLNSLNDAQRQAVAAKLGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSI
LSVTFTNKAAAEMRHRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEARLVQNFQILDSD
DQQRLIKRVMRELGLDEQKWPARQAQWFINGQKDEGLRPQHIQAGGDLFLATMREVYTAY
EQACERAGVIDFSELLLRALDLWRDHPGLLEHYQRRFQHVLVDEFQDTNAVQYAWLRLLA
RGGASLMAVGDDDQSIYGWRGAKIENIHQYTADFPDAEMIRLEQNYRSTGGILKAANALI
VNNSGRLGKELWTDMGEGEPLTLYAAYNEHDEARYVVETIESLVKQGNARNEIAILYRSN
AQSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLIEGRGNDAALERVINVPPRG
IGEKTVEAIREHARHSQVSMWEAMCQLLAAKALKGRAASALGAFIELIEGLATKVTDMPL
HTMTQTTIEQSGLITYHQEEKGEKGQARVENLEELVSAARNFESTEEDADLSPLSAFLGH
ASLEAGDTQADEHEDSVQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERR
LAYVGITRAMRQLVMTYAETRRLYGSETYNKVSRFVREIPAGLIQEVRLSNSVSRPFSGA
KTATNSNLFANANIPQTAFNLGQRVQHAVFGEGVILNFEGSGAQARVQVNFAEGSKWLML
GYAKLEAI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcacacagatgacctctccctcctgctgaactccctcaacgatgctcaacgccaggcc
gtcgcggccaagctcgggcgtcaactggtgcttgctggcgccggctccggtaaaacccgc
gtgctggtgcatcgcatcgcctggctgatccaggtggaacaagcatcgccgcactcaatc
ctgtcggtgacgttcaccaacaaggctgcggcagaaatgcgccatcggatcgagcaactg
ctggggatcaacccggcaggcatgtgggtcggtaccttccacgggctggcccatcgcctg
ctgcgggcccactggcaggaagcacggctggtgcagaacttccagatcctcgacagcgat
gaccagcagcgcctgatcaagcgggtcatgcgcgaactggggctggacgagcagaagtgg
ccggcacgccaggcccagtggttcatcaacgggcagaaggatgaaggcctgcgcccgcag
catatacaggcggggggcgacctgttcctggcgaccatgcgcgaggtgtataccgcctac
gaacaggcctgtgagcgcgcgggggtcatcgacttctccgaactgttgctgcgtgcactg
gacctgtggcgcgaccacccgggcctgcttgagcactaccagcggcgcttccagcatgta
ctggtagacgagttccaggacaccaacgccgtgcagtacgcctggctgcgcctgctggcg
cgcggtggtgccagcctgatggcggtgggcgacgacgaccagtcgatctacggctggcgc
ggcgccaaaatcgagaacattcaccagtacaccgccgacttccccgacgccgaaatgatc
cgcctggagcagaactaccgctccaccggcggcatcctcaaggctgccaacgccctgatc
gtcaacaacagcgggcgcctgggcaaggagctgtggactgacatgggtgaaggcgaaccg
ctgacgctgtacgcggcctacaacgagcacgacgaagcgcgctacgtggtggaaaccatc
gaaagcctggtcaagcagggcaatgcgcgtaacgaaatcgccattctctaccgttccaac
gcccaatcgcgggtgctggaagaggccctgctgcgcgagcgtatcccgtaccgtatctat
ggtggccagcgcttcttcgagcgcgccgaaatcaagaacgccatggcttacctgcggctg
atcgaagggcgtggcaacgatgcggccctggagcgggtgatcaacgtgccgccacgcggc
attggcgagaaaaccgtcgaagccatccgcgagcatgcccgccacagccaggtgtcgatg
tgggaagccatgtgccagctgttggctgccaaggcgctgaaaggccgcgccgccagcgct
ctgggtgccttcatcgagctgatcgaggggttggccacgaaggtcacggacatgccgctg
cataccatgacccagaccaccatcgaacaatccgggctgatcacctatcaccaggaagaa
aagggtgaaaagggccaggcacgggtagaaaacctcgaggaactggtcagcgcggcgcgc
aacttcgagtccaccgaagaagacgccgatctctcgccgctttcggccttcctcggccat
gcctcgctggaagccggcgatacccaggccgatgagcatgaagacagcgtccagctgatg
accttgcacagcgccaaaggcctggagttcccgtatgtgttcctggtgggcatggaagaa
ggcctgttcccgcacaagatgagcctggaagaacccggccgcctggaagaggagcgccgc
ctggcctatgtgggaattacacgggctatgcgccagctggtcatgacctacgccgaaaca
cgtcgcctgtatggcagcgaaacctacaataaggtgtcgcgtttcgtacgtgaaattccc
gcaggccttattcaggaggtgcgtctgtccaacagcgtcagtcgcccgttcagtggggcc
aagacggccaccaacagtaacctgtttgccaatgccaatattccacagacggcgttcaac
ctcggccagcgcgtgcaacatgcggtgtttggcgaaggcgtgatcctcaacttcgagggt
tcgggcgcccaggcacgggtacaagtgaattttgccgaaggcagcaagtggctgatgctg
gggtatgcgaagctcgaagccatctga
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