Pseudomonas putida H8234: L483_32265
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Entry
L483_32265 CDS
T02706
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pput
Pseudomonas putida H8234
Brite
KEGG Orthology (KO) [BR:
pput00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pput03016
]
L483_32265 (trmE)
Transfer RNA biogenesis [BR:
pput03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
L483_32265 (trmE)
Prokaryotic type
Methyltransferases
L483_32265 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
Ras
RsgA_GTPase
ABC_tran
AAA_28
SRPRB
DUF4702
Roc
Golgin_A5
Motif
Other DBs
NCBI-ProteinID:
AGN81220
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Position
complement(6835472..6836842)
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AA seq
456 aa
AA seq
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MNTVRETIAAIATAQGRGGVGIVRLSGPLAGKAGQLITGRTLTPRHAHYGPFRDDEGLVL
DEGIALFFPGPNSFTGEDVLELQGHGGPVVLDMLLQRCVQVGCRLARPGEFSERAFLNDK
LDLAQAEAIADLIEASSSQAARNALRSLQGEFSKRVHSLTEALIALRIYVEAAIDFPEEE
IDFLADGHVLSMLDAVRGELSTVQREAGQGALLRDGMTVVIAGRPNAGKSSLLNQLAGRE
AAIVTDIAGTTRDILREHIHIDGMPLHVVDTAGLRDTDDHVEKIGVERALKAIGEADRVL
LVVDSTAPEASDPFALWPEFLAQRPDPAKVTLIRNKADLSGERVALEQCEDGHVTITLSA
KGDDTGLQLLRDHLKACMGYEQTSESGFSARRRHLDALRQASEHLEHGRAQLTLAGAGEL
LAEDLRQAQHALGEITGAFSSDDLLGRIFSSFCIGK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgtgcgtgaaaccatcgccgccatcgctaccgcccaaggccgcggtggtgtg
ggtattgtcaggttgtccggccctttggctggcaaggccgggcagttgatcaccggtcgt
acgctgacccctcgccatgcccattacggcccgttccgcgacgatgaagggctggtgctt
gacgaggggattgcgttgttcttccctgggccgaactcgttcaccggcgaagatgtgctt
gaactgcagggccacggtggcccggtggtcctggacatgctgctgcagcgctgtgtacaa
gttggctgtcgcctggcccgcccaggtgaattcagcgaacgcgcgttcctcaacgacaag
ctcgacctggcccaggccgaagccattgccgacctgatcgaggccagctccagtcaggcg
gcacgcaacgccctgcgctcactgcaaggggaattctccaagcgtgtgcacagcctgacc
gaggcgctgatcgccctgcgcatctacgtcgaggcagcaatcgacttccccgaagaggag
atcgacttcctcgccgatggccacgtcctgtcgatgctcgatgcagtgcgcggcgagtta
tccaccgtgcaacgtgaggccgggcagggtgccttgctgcgtgacggcatgactgtggtc
atcgccgggcggccgaatgccggcaagtcgagcctgctgaaccagctggctggccgcgaa
gcggccattgtcaccgatatcgccggcaccacccgggacatcctgcgcgaacatatccac
atcgacggcatgccgctgcacgtggtcgatactgccgggttgcgtgacaccgacgatcat
gtggaaaagatcggcgtagaacgcgccctgaaggccattggcgaggctgatcgtgtgttg
ctggtggtcgactccactgcgcccgaggccagcgacccgttcgccttgtggcccgagttt
ctcgctcagcggccggacccggccaaggtcacgctgattcgcaacaaagccgacctgagt
ggtgagcgggtagcgctggaacagtgcgaggatggccatgtgaccattactctcagcgcc
aagggcgacgacacagggttgcaactgctacgtgaccatctgaaggcctgcatgggttac
gaacagacctcagagagcggtttcagcgcccgcaggcgccatttggatgctttgcgccag
gccagcgagcacctggagcatggccgtgctcagctgacattggcgggcgcaggggagctt
ctggctgaggatttgcgccaggcacagcatgcgctgggggaaatcacaggagcattcagc
tcggatgacctgctggggcggattttctccagcttctgcatcggcaagtaa
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