Pseudomonas sp. UW4: PputUW4_00204
Help
Entry
PputUW4_00204 CDS
T02357
Name
(GenBank) S1 RNA binding domain protein
KO
K06959
protein Tex
Organism
ppuu
Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
PputUW4_00204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
T2SSK
HHH_6
RuvX
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AFY17412
LinkDB
All DBs
Position
complement(229709..232033)
Genome browser
AA seq
774 aa
AA seq
DB search
MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRY
LRELDERRISILASIEEQGKLTPQLERDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGELADGLFNDPSLSPETEAARFIDAEKGVADAKAALEGAKYILMERFAEDAGLLDKLRN
YLKQEATLSARVIAGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVG
DELPGTMHPCEGMIGQHVGIQNQNRAADKWLGEVVRWTWKVKLYTHLETDLLGELRDGAE
TEAINVFAHNLHDLLLSAPAGPRATLGLDPGLRTGCKVAVVDSTGKLLDHATVYPHVPHN
KWDQTIAVLAALCAKHSVDLIAIGNGTASRETDKLAAELIKKYPAMKMTKVMVSEAGASV
YSASELASKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNAVGVDVNTASVALLARISGLNATLAQNIVSHRDEHGAFKTRAALKKVARL
GEKTFEQAAGFLRVMNGDNPLDASAVHPEAYPLVQRIAAETDRDIRSLIGDSGFLKRLDP
KKFTDETFGLPTVTDILQELDKPGRDPRPEFKTAEFQEGVEDLKDLQLGMILEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS
DTPGEKIDGARGARPGSAPRQSQNTAPRKETTAAAPSNNAMASLFANAKQLKKR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgcatcgccgaggaactcggtgtacgcccacaacaggtcgaa
gcggccgtcgcgctactcgatgaaggctctaccgttcccttcatcgcccgttaccggaaa
gaagtgaccggcagcctcgacgatacgcaattgcgtcatctggaagagcgcctgcgctac
ctgcgagaactcgacgaacggcgcatcagcatccttgccagcatcgaagagcaaggcaag
ctgaccccgcaacttgaacgcgacatcaagcttgccgacaccaagacccgtctcgaagac
ttgtacctgccgtacaagcagaagcgccgcaccaagggccagatcgccctggaagccggc
ctcggcgaactggccgacggcttgttcaacgacccgtccctgagcccggaaaccgaagcc
gcacgtttcatcgacgccgaaaaaggcgtggccgacgcgaaggcagccctcgaaggcgcc
aagtacatcctcatggagcgcttcgccgaagacgccggcctgctggacaagctgcgcaac
tacctcaagcaggaagccaccctcagtgcccgcgtgattgccggcaaggaagaggaaggc
gccaagttccgcgattacttcgaacacgacgaaccgctgaaaagcatgccgtcgcaccgc
gcgctggcgattttccgtggccgcaacgaaggcatcctcagctccgcgctgaaagtcggc
gacgaactgccgggcaccatgcacccgtgcgaaggcatgatcggccagcatgtcggcatc
cagaaccagaaccgcgccgccgacaaatggctgggcgaagtcgtgcgctggacctggaag
gtcaagctctatacccatctggaaaccgacctgctgggcgagctgcgcgatggcgcggaa
accgaagcgatcaacgtgttcgcccacaacctgcacgacctgctgctgtcggccccggcc
ggcccgcgcgccactttgggcctcgaccctggcctgcgcaccggctgcaaggtggcggtg
gttgattccaccggcaagctgctggatcacgccacggtttacccgcacgtgccgcacaac
aagtgggaccagaccatcgccgtactcgccgccctgtgcgccaagcactcggtggacctg
atcgccatcggcaacggtaccgccagccgtgaaaccgacaagctcgccgccgagctgatc
aaaaaatatccagcgatgaagatgaccaaggtcatggtctccgaggccggtgcatcggtt
tactcggcatctgagctggcctcaaaggaattcccggacctcgacgtgtcgatccgtggt
gccgtctcgattgcccgtcgcctgcaggatccgctggccgagctggtgaagatcgatccg
aaatccatcggtgtcggccagtaccagcacgacgtgtcgcagctgaaactggcccgtggc
ctggatgcagtggtcgaggactgcgtgaacgccgtcggcgtcgacgtgaacaccgcttcc
gtggcgttgctggcacggatttccggactcaacgcgaccctggcgcagaacatcgtcagc
caccgcgacgagcacggtgcgttcaagacccgcgctgcgctgaagaaagtcgcgcgcctg
ggtgaaaaaaccttcgaacaggccgccggattcctgcgcgtgatgaacggagacaatccc
ctggacgcctccgcagtgcacccggaagcctatccactcgtgcagcgtatcgccgccgag
actgatcgcgatattcgttcgttgattggcgacagtggtttcctcaagcgcctggacccg
aaaaaattcaccgacgaaactttcggtctgccaactgtcaccgacatccttcaggaactg
gataagcccggccgcgacccgcgccccgagttcaagaccgccgagttccaggaaggcgtc
gaagacctcaaggacctgcaactgggcatgatcctcgaaggcgtggtgaccaacgtgacc
aacttcggtgccttcgtcgatatcggcgtgcatcaggacggtttggtgcatatctccgcg
ctttcggagaagttcatcaaggatccgcgcgaagcggtgaaggccggtgacgtggtgaaa
gtgaaggtcatggaagtcgacatcccgcgcaaacgcgttggcctgtcgatgcgcatgagc
gataccccgggcgagaaaatcgacggcgctcgcggtgcgcgtccggggtcggcgccacgc
caatcccagaacactgcaccgcgcaaggaaaccacggcggcagcaccgagcaacaacgcc
atggcttcgctgttcgccaatgccaagcagttgaagaaacgctga
DBGET
integrated database retrieval system
