KEGG   Pseudomonas sp. UW4: PputUW4_00231
Entry
PputUW4_00231     CDS       T02357                                 
Name
(GenBank) sigma-54 dependent DNA-binding response regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
ppuu  Pseudomonas sp. UW4
Pathway
ppuu02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ppuu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PputUW4_00231
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:ppuu02022]
    PputUW4_00231
Two-component system [BR:ppuu02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   PputUW4_00231
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_50 AAA_2 HTH_8 FleQ Mg_chelatase AAA AAA_16 DUF6716 HTH_Tnp_ISL3 bpMoxR
Other DBs
NCBI-ProteinID: AFY17439
UniProt: K9NCC5
LinkDB
Position
complement(257245..258639)
AA seq 464 aa
MTIDNRIQVVLIDDDPHLRQALSQTLDLAGLKILPLAEAKGLAGQLERDWPGVVVSDIRM
PGMDGLELLTELHAQDPELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLDSVRR
ALALRRLVLDNRSLRLALSDRNELSARLVGHSPSMLRLREQIGALAATRADVLILGETGA
GKEVVARALHDLSGRRNGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFAN
GGTLFLDEIESMSLDVQVKLLRLLQERVVERLGGNQQIPLDIRIIAATKEDLRQAADQGR
FRADLYYRLNVAPLRIPPLRERGEDALMLFQHFADEASARHGLPPHELQPGQRALLLRHT
WPGNVRELQNAAERFALGLELALDNSTPQGGAGPMAEVVSGGLSEQVENFEKTLIAAELA
RSHSSVRSVAEALGIPRKTLHDKLRKHGLSFSDSGASAHPDDLD
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgaccatcgacaaccgcattcaggtcgtgttgatcgacgacgatccccacttgcgccag
gccttgagccagacgctggatctggccggtctgaagatcctgccgctggccgaagccaag
ggcctggccgggcaactggagcgcgactggccgggtgtggtggtcagcgatatccgcatg
cccggcatggacggtctggaactgctgaccgaactgcacgcccaggaccctgaattgccg
gtgctgctgatcactggccacggcgatgtgccactggcggtgcaggccatgcgcgccggg
gcctatgactttctcgagaagccgttcgccagcgacgccctactcgacagcgtgcgccgc
gcgctggccctgcgccgcttggtgctggacaaccgtagcctgcggttggccttgagcgac
cgcaacgagctgagcgcccgcctggttggccattcaccttcgatgctgcgcctgcgcgag
cagatcggcgccctggcggcgaccagggccgacgtgctgatcctcggcgaaaccggcgcg
ggcaaagaagtggtggcccgggcgctgcacgatctatcaggccggcgcaacggtccgttc
gtggcgatcaatgccggtgctctggccgaatcagtggtcgaaagcgagctgttcggccac
gagcccggcgccttcaccggcgcgcagaaacgccgcatcggcaagttcgaattcgccaat
ggcggcaccttgttcctcgatgaaatcgaaagcatgagcctggatgtgcaggtcaaattg
ctgcgcttgctgcaggagcgcgtggtcgaacgcctaggcggcaatcaacagatccccctg
gacatccgcatcatcgccgcgaccaaggaagacctgcgccaggcagcggatcaagggcgc
tttcgtgccgacttgtattaccgcctgaacgtcgcgccgctgcggattccccccttgcgc
gaacggggcgaagacgcactgatgctgttccagcatttcgccgacgaagccagtgcccgc
cacggcttgccgccccatgaactgcaaccgggacaacgtgccttgctgctgcgccacacc
tggcccggcaacgtgcgcgagctgcaaaatgcggccgagcgttttgccctcgggctggaa
ctggccctcgacaacagcacgccgcaaggcggtgctggccctatggccgaagtcgtcagc
ggtgggttgagcgagcaagtggagaacttcgaaaaaaccctaatcgccgccgaactggca
cgctcgcacagctccgtgcgcagcgtcgccgaagccctcggcattccgcgcaagaccctg
cacgacaaactgcgcaagcacggtttgagcttctcggacagtggcgcttcggcccaccct
gacgacctcgactga

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