Pseudomonas sp. UW4: PputUW4_00399
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Entry
PputUW4_00399 CDS
T02357
Symbol
rfaG
Name
(GenBank) lipopolysaccharide core biosynthesis protein
KO
K02844
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00540
Lipopolysaccharide biosynthesis
ppuu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PputUW4_00399 (rfaG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppuu01005
]
PputUW4_00399 (rfaG)
Lipopolysaccharide biosynthesis proteins [BR:
ppuu01005
]
Core region
PputUW4_00399 (rfaG)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AFY17607
LinkDB
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Position
458393..459514
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AA seq
373 aa
AA seq
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MQLAFVLYKYFPFGGLQRDFMRIALECQKRGHQIRVYTLIWEGDVPAGFEVLVAPVKAFF
NHRRNEKLSEWMEADLVKRPVDRLIGFNKMPGLDVYYAADGCFEDKAQNLRNSLYRRWGR
YRHFAEYERAVFAKDAKTEVLMISEVQQPLFIKHYDTPLERFHLLPPGIAQDRRRPADAD
DIRAGFRAEFNLKDDELLLVQIGSGFKTKGVDRSLKALAALPAELRRRTRLFVIGQDDPK
LFQMQSATLGLGDNVTFLKGRSDIPRFLLGADLLIHPAYNENTGTVLLEALVAGLPVLVS
AVCGYAHYIAEADAGLVLDEPFDQAQLTQYLTGMLNDAQARAAWSRNGLAFAETADLYSM
PQHAADVILAEHA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgcaattggcatttgtcctgtacaaatattttccgtttggcggcttgcagcgcgatttc
atgcgcattgccctggagtgtcagaaacgcggtcatcagattcgcgtctacacgctgatc
tgggagggcgacgtaccggctggcttcgaagtgctggtggcgccggtcaaggcgttcttc
aaccatcgacgcaacgaaaaactcagtgaatggatggaagcggacctggtcaagcgaccg
gtcgaccgcttgatcggcttcaacaagatgccgggcctggacgtctactacgccgccgac
ggctgcttcgaagacaaggcgcagaacctgcgcaactcgctctaccgccgctggggccgc
tatcgccacttcgccgaatacgagcgcgcggtgttcgccaaggatgcgaagaccgaagtg
ctgatgatttccgaggtccagcagccgctgttcatcaagcattacgacacgccgctggag
cgttttcacctgctgccaccgggtatcgcccaggaccgtcgccgaccggctgatgccgat
gacattcgcgccgggttccgcgctgagttcaatctcaaggacgacgaactgctgctggtg
cagatcggctccgggttcaagaccaagggcgtcgatcgcagcctcaaggcgctggcggca
ttgcctgccgagctgaggaggcgcacccggctgtttgtaattggccaggatgaccccaag
ttattccagatgcagagtgcgacattggggttgggtgacaacgtcacgttcctcaagggg
cgcagcgatatcccgcgtttcctgttgggtgccgatctgttgatccacccggcgtacaac
gaaaataccggcaccgtgctgctcgaagcactggtggccggcttgccggtgttggtgagc
gcggtgtgcgggtacgcccattacatcgccgaggccgatgctggcctggtgttggacgaa
cccttcgatcaggcacagctgacgcaatacctgaccggcatgttgaacgacgctcaagca
agggcggcctggagccgcaatggtctggccttcgccgaaacggccgacctctacagcatg
ccgcaacacgcggccgatgtgattctggcggagcacgcttaa
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