Pseudomonas sp. UW4: PputUW4_00421
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Entry
PputUW4_00421 CDS
T02357
Symbol
thiC
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00730
Thiamine metabolism
ppuu01100
Metabolic pathways
ppuu01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PputUW4_00421 (thiC)
Enzymes [BR:
ppuu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
PputUW4_00421 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AFY17629
LinkDB
All DBs
Position
484671..486560
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AA seq
629 aa
AA seq
DB search
MTIKAKNAINLSESAKVDEQSVQPFTRSQKIYVQGSRPDIRVPMREITLDVTPTDFGGEI
NAPVTVYDTSGPYTDPNVVIDVRKGLGDVRSAWIDDRGDTERLSGLSSNFGQERLADPEL
TKLRFAHVNNPRRAKAGANVSQMHYARKGIITAEMEYVAIRENMKLQEARAAGLLKQQHA
GHSFGASIPKEITPEFVREEIARGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALG
SSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGV
AEDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLAH
HKENFLYTHFDEICEIMKAYDVSFSLGDGLRPGSIADANDEAQFGELETLGELTKIAWKH
DVQCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIG
WFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFE
FRWEDQFNLGLDPDTARSYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQRI
EAVDVDVAQGMAEQAERFKQEGSQLYKKV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaccataaaagcaaaaaacgcgatcaacctcagtgagtcggccaaggtcgatgagcag
tcggttcaaccctttacccgttcgcaaaaaatctacgtccagggctctcgcccggacatc
cgcgtgccgatgcgcgaaatcaccctggacgtgacgccgactgacttcggtggcgaaatc
aacgccccggtgactgtctacgatacctcgggtccctacaccgatcccaacgtggtgatt
gacgtgcgtaaaggcctgggcgacgtgcgttcagcgtggatcgacgaccgtggtgacacc
gaacgcctgagtggcctgagctcgaacttcggtcaggagcgccttgccgatccagagctg
accaaactgcgctttgcccacgtgaacaacccgcgccgcgccaaggccggggccaacgtc
agccagatgcactacgcgcgcaaaggcatcatcaccgccgagatggaatacgtcgccatc
cgcgaaaacatgaagctgcaagaggcccgcgccgccggcctgttgaagcaacagcacgcc
ggccacagtttcggcgcgagcatcccgaaagaaatcacccctgaattcgtccgagaggaa
atcgcccgcggccgcgcgatcatcccggccaacatcaaccacaccgaactggaaccgatg
atcatcggccgtaacttcctggtgaagatcaacggaaacatcggcaacagcgccctgggg
tcgtccatcgaagaagaagtggcgaaactgacctggggcattcgctgggggtcggacacg
gtcatggacctgtccaccggcaagcacatccacgaaacccgtgagtggatcatccgcaac
tcgccggtaccgatcggtacggtgccgatctaccaggcgctggagaaggtcaacggcgtg
gccgaagacctgacctgggagctgttccgcgacacgctgatcgaacaggccgagcagggc
gtcgactacttcaccatccacgccggggtgttgctgcgctacgtaccgatgaccgccaag
cgcgtgaccggcatcgtgtctcgtggcggctcgatcatggccaagtggtgtctggcgcac
cacaaagagaacttcctctacactcatttcgacgaaatctgcgaaatcatgaaggcctac
gacgtcagcttctcgctgggtgatggcctgcgtccgggttcgattgccgacgctaacgac
gaagctcagttcggcgagctggaaaccctcggcgagctgaccaagattgcctggaaacac
gatgtgcagtgcatgatcgaaggcccgggccacgtgccgatgcagttgatcaaggagaac
atggacaagcagctggagtgctgcgatgaggcgccgttctacaccctcggtccgctgacc
accgacatcgcgccgggctacgaccacatcacctcgggcatcggtgcggcgatgatcggc
tggttcggttgcgccatgctctgctacgtgacgccgaaggagcacctgggcctgccgaac
aaggatgacgtgaagaccgggatcatcacctacaagatcgccgcgcacgccgccgatctg
gcgaaggggcacccgggcgcacagatccgcgacaatgccttgagcaaggcgcgtttcgag
ttccgttgggaagaccagttcaacctgggcctcgatccggataccgcgcgttcgtatcac
gacgaaaccctgccgaaggattcggccaaggtcgcgcacttctgctcgatgtgcgggccg
aagttctgctcgatgaaaatcacccaggaagtccgcgagtatgcggccaaccaacggatc
gaagcggtcgacgtggacgtcgcccaaggcatggccgaacaggctgagcgcttcaagcag
gaaggcagtcagttgtacaagaaggtttga
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