KEGG   Pseudomonas sp. UW4: PputUW4_00428
Entry
PputUW4_00428     CDS       T02357                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
ppuu  Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:ppuu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppuu03032]
    PputUW4_00428 (parE)
   03036 Chromosome and associated proteins [BR:ppuu03036]
    PputUW4_00428 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ppuu02048]
    PputUW4_00428 (parE)
Enzymes [BR:ppuu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     PputUW4_00428 (parE)
DNA replication proteins [BR:ppuu03032]
 Prokaryotic type
  DNA Topoisomerases
   PputUW4_00428 (parE)
Chromosome and associated proteins [BR:ppuu03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    PputUW4_00428 (parE)
Prokaryotic defense system [BR:ppuu02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    PputUW4_00428 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_2 TOPRIM_C HATPase_c_3
Other DBs
NCBI-ProteinID: AFY17636
LinkDB
Position
491793..493697
AA seq 634 aa
MATPSASSYNADAIEVLSGLDPVRKRPGMYTDTSRPNHLAQEVIDNSVDEALAGHASSVQ
VILHADHSLEVSDDGRGMPVDIHPEEGVSGVELILTKLHAGGKFSNKNYQFSGGLHGVGI
SVVNALSTEVRVRVKRDGNEYQMTFKDGYKATELEIVGTVGKRNTGTSVFFAPDPKYFDS
PKFSISRLKHVLKAKAVLCPGLLVSFEDKATGEKVEWHYEDGLRSYLVDAVSEFERLPDE
PFCGSLAGNKEAVDWALLWLPEGGDAVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCE
FRSLLPRGVKLAPEDVWERIAFVLSMKMQEPQFSGQTKERLSSREAAAFVSGVVKDAFSL
WLNAHPETGMLLAELAINNAGRRLKASKKVERKRITQGPALPGKLADCAGQDPMRSELFL
VEGDSAGGSAKQARDKEFQAILPLRGKILNTWEVDGSEVLASQEVHNIAVAIGVDPGAAD
MSQLRYGKICILADADSDGLHIATLLCALFVQHFRPLVDAGHVYVAMPPLYRIDLGKEIY
YALDEAERDGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLEDF
EATSEMMDMLLAKKRAGDRKTWLESKGNLAEVLG
NT seq 1905 nt   +upstreamnt  +downstreamnt
atggccactcccagcgctagctcttataacgccgacgccatcgaagtcctctcgggcctc
gacccggtgcgcaaacgccccggcatgtacaccgacaccagtcggccgaaccaccttgcc
caggaagtcatcgacaacagcgtcgacgaagccctggccgggcatgcctcctcggtacag
gtgatcctgcatgccgaccattcgctggaagtcagcgatgacggccgtggcatgccggtg
gacattcaccccgaggaaggtgtttcgggcgtcgagttgatcctcaccaagcttcatgcc
ggtggcaagttttccaacaagaactaccagttctccggcggtttgcacggggtgggtatt
tccgtggtcaacgctttgtccaccgaagtgcgggtgcgggtcaagcgtgacggcaacgag
taccagatgaccttcaaggatggctacaaggccaccgaactggagatcgttggcactgtt
ggcaaacgcaacaccggcaccagtgtgttcttcgcaccggatccgaaatacttcgactcc
ccgaaattctccatcagccgcctcaagcacgtgctcaaggccaaggccgtgttgtgcccg
gggctgctggtcagctttgaagacaaggccaccggcgagaaagtcgaatggcattacgaa
gacggcctgcgttcctatctggtggatgcggtcagcgaattcgagcgcctgccggacgag
ccgttctgcggcagcctggccggtaataaggaagcggtcgattgggctctgctgtggctg
ccagaaggtggcgacgcggtacaggaaagctacgtcaacctgatcccgaccgcccagggc
ggtacccacgtcaacggtttgcgccaaggtctgctcgacgccatgcgcgagttctgcgaa
ttccgcagcctgctgccgcgcggcgtgaagctggcgccggaagacgtctgggagcgcatt
gccttcgtactgtcgatgaaaatgcaggagccgcagttctccggccagaccaaggagcgc
ctgtcgtcccgtgaagcggcggcgtttgtttccggtgtggtcaaggatgcgttcagcctg
tggctcaacgcccacccggaaaccggcatgctgctggcggaactggcgatcaacaacgcc
ggccgtcgcctcaaggccagcaagaaggtcgagcgcaaacgcattacccaaggcccggcg
ctgccgggcaagctggccgactgtgccgggcaggacccgatgcgttccgagctgttcctg
gtggaaggtgattccgccggcggctcggccaagcaggcgcgggacaaagaattccaggcg
atcctgccgttgcgcggcaagatcctcaacacctgggaagtcgacggcagcgaagtgctg
gccagccaggaggtgcacaacatcgccgtggcgatcggtgtcgatccgggtgcggccgac
atgagccaactgcgctacggcaagatctgcatcctcgccgacgccgactccgacggtctg
cacatcgcgaccttgctgtgcgccttgttcgtccagcacttccgcccgctggtggatgcc
ggtcacgtctacgtggccatgccgccgctgtaccgcatcgacctgggcaaggaaatctac
tacgccctggatgaagccgaacgcgacggcatcctcgatcgtctggtagccgagaagaaa
cgcggcaaaccacaggtcacccgattcaagggcctgggtgaaatgaacccgccgcagctg
cgtgaaaccaccatggacccgaacactcggcgtctggtgcagttgaccctggaagatttc
gaggcgacctcggaaatgatggacatgctgctggcgaagaaacgcgctggcgaccgcaag
acctggctggagtccaagggcaacctggccgaggtgctgggctga

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