KEGG   Pseudomonas sp. UW4: PputUW4_00444
Entry
PputUW4_00444     CDS       T02357                                 
Symbol
orn
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
ppuu  Pseudomonas sp. UW4
Pathway
ppuu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ppuu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PputUW4_00444 (orn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppuu03019]
    PputUW4_00444 (orn)
   03009 Ribosome biogenesis [BR:ppuu03009]
    PputUW4_00444 (orn)
Messenger RNA biogenesis [BR:ppuu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PputUW4_00444 (orn)
Ribosome biogenesis [BR:ppuu03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    PputUW4_00444 (orn)
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: AFY17652
LinkDB
Position
510392..510934
AA seq 180 aa
MQNPQNLIWIDLEMTGLNPDTDVIIEMATIVTDSDLNTLAEGPVIAIHHSDEILAGMDEW
NTRQHGGSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPICGNSICQDRRFLYTHMK
SLESYFHYRNLDVSTLKELAARWAPDVRDSFKKGSTHLALDDIRESIAELQHYRKHFIKF
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcaaaatccgcagaacctgatctggatcgacctggaaatgaccggtctgaaccctgat
accgacgtcattatcgaaatggccaccatcgtcaccgacagtgacctgaacaccctggcc
gaaggcccggtgatcgccattcaccacagcgacgaaatcctcgccggcatggacgagtgg
aacacccgtcagcatggtggttccgggctgacccagcgggttcgcgatagccgtatcagc
atggccgaagccgaagccgaaaccatcgccttcctggagaagtgggtgccgaagggcaaa
tcgccgatctgcggcaacagcatttgccaggaccgtcgcttcctttatacccacatgaaa
tccctggaaagctatttccactaccgcaacctcgacgtgtccacgctcaaagagctggcg
gcgcgctgggcaccggacgtgcgtgacagcttcaagaagggcagcacccacctggcgctg
gacgacatccgcgaatccatcgccgagttgcagcactaccgcaagcatttcatcaagttc
tag

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