Pseudomonas sp. UW4: PputUW4_00664
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Entry
PputUW4_00664 CDS
T02357
Name
(GenBank) putative helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
ppuu
Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
PputUW4_00664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
ResIII
Cas3-like_C_2
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AFY17871
LinkDB
All DBs
Position
782245..788577
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AA seq
2110 aa
AA seq
DB search
MQPLIVSQQVTQGVADFLRTAFPSTTTGFEGLLERFLAERSNIFKGPYLTLPLPFRKQLN
GGLPAFPWLPASFVPHAHQAKAFARLAGSEAQSTLVATGTGSGKTECFLYPILEHCRVAR
AEGRRGIKAIILYPMNALASDQSGRVAKEIVKAAGLSGIRAGLYVGDAPAVESQTVAELS
DGSYSVITDRNALRENPPDILLTNYKMLDFLLLRAADAPLWAHQQPDTLRYLVVDELHTF
DGAQGTDLACLIRRLKGRLKAPPGQLVCVGTSATLGDDGVSDLLAFAGDVFGEVLDDSAV
IAEDRESVGDYLAEALVEFTQSPQPSDLDTLAPENFDDLHAYLAAQAPLWFGEPCSVTQA
EDFAWRCGLGKDLKSHFAFQNLLRDLERLGPKSVLLDDLLVLLKRRLPSCDDERFALLWL
SSLLSLVAHARQDAHQNFFLQVKVEIWLRELRRMVAVLDAEPQLRHHDDLRKADMDRLHL
PVIHCRECHATGWGSTQQKISPNQLTHDLQAFYSAFFAEDVSTRFIFPSSAGANPAVFQR
KQVCPACGTLHQASQTECSHCEDQPLLAVDIASNLREGTRNGAKYTKSHHDCPFCAGYKT
LTIVGSQAASLAAVMVGQLFATRFNPDKKLIAFSDSVQDAAHRAGFLAARTWRMNLRPAL
AQVIADAYAAGRPVTLENLPTAFAQRWRTALGDGHYIANFLPPQMQWLRDYETLMEEGAL
PESSNLPGELARVLPWVLNAEFGQDAHIGRTLVATGTACVVPLAGKLDEAAQWLLPRLRD
TLEPLAAAQLDEVVVLLRGLLENMQRIGAWRDQELGFYARMGSSPWGYKKNPSQFKLLTS
PRPPRFLTLAEFGRCVSVTKSHARLFSDWAFKALPALHELALGTDALIAPLYRLALEALE
SVGLAGFEEATEKPDIRVWGLEPSAFHVILGGKVWRCACCHSTTLSGPEDDFSEQACRRV
DCRGELHALDVPGDFYRKLYLNADIRRVVAHEHTGLLPRETREAVERNFKSNSDRPGGIN
VLSATPTLEMGIDIGDLSSVLQCSVPPQQANYIQRAGRAGRSTGNALLMSMATSKPHDLY
FWNDPKTMIAGSVQAPGVFLNASAVLERQLTAFTLDCWVHENGRAAQIPPEIRGVFTAIN
NQTTSKFPYPWLSYVEQHQASLLERFLRLFNQGELCPLSDGTCQWLANFIQGSSGDSSPL
AYKIVNRLQGIASDVESIKRKREAAVKEIDKLQALTVRGEDQDLELARLLQDRTALSRLI
GSIEGKATLNVLTDEGLLPNYAFPEQGVLLRSIIVRDSKPGTSAPDPLTFEYERPGSTAI
TELAPNNTFYAEGRRVVINQIDVSKIKPEHWRFCRQCSYTEPLSSGDQHPNCPRCGDTLW
RDSGRVHEMLRLTTVFARTLDRDSRIADDSDERQRGFYVRQALVDSPPDAVRQAFVIDEQ
TFPFGFEFLDRVTFREVNFGEQSAEGMPMEIGGKELSRPGFSICPECGTLQRKRKAEELY
RNHSSWCAKRKNPEASTQQCVFLYREFTSEGIRLFLPEVGFADTNEALLSFVSALELGVA
RRFRGAVDHLRIALDMRMAAGSETPRCYLVIYDSVPGGTGYLKELMRAPEPLLEVFEKAL
EALNSCTCNQNADTDGCYRCVYRYHNSHDRKSISRRTAQKLLGEVMQYKGALKPVTHLAD
AQPANQLLDSMLEKRFVEALRREHEGEKFKLSELLFKGKAGYQIQAGSRRWRMELQVNLG
ASEGVLISCKPDFVFWPDDAADDLPVAVFVDGWQYHKDIITTDMAKRMAVAKSGKFSVWT
LTWDDVECALQNQVLPTPSPWATLLNDDPQQVVQKLCAAQGIATLSNFKSLPSFSQLHQR
LAHGQHQVLGKLAVSLATGMLMPPGDTTALQVLRGGAFWQRLDELGLLPDLQMHRLSQRQ
LGTAWMLAIAMHPEHLKQVMRGNGSADSEPVLVGEWKEDGLPESELQLRWQQLWQALNLL
LPLSQIWVGNAEMPGLPALQDCSALKAKSGGLSEAWQEALSLAAHEVQSWGLALAGLDVT
APEVGYELMDEKGRVIAEAELAWPDVRTAVLLPDSEAEAALFAGQGWHSFTADGSELPDE
LRTLLMETLA
NT seq
6333 nt
NT seq
+upstream
nt +downstream
nt
atgcagccacttatcgtttctcagcaggtcactcagggtgtcgcagactttctgcgcacc
gcattcccgtccactactactggttttgagggcttgctggagcgctttttggctgagcgc
agcaatatcttcaaagggccatatctgacattgccactgccatttcgcaagcagcttaat
ggcgggttaccagcttttccttggttacccgccagctttgtgccccatgcacatcaggcc
aaggcttttgcgcggctggcgggatcagaggctcaatccacgttggtggcaacgggtacg
gggtcgggtaagaccgagtgctttctatatccgatccttgagcattgtcgagtggcgcgt
gccgaggggcggcgtggcatcaaggcgatcatcctctatcccatgaatgccttggccagc
gaccaatctgggcgcgtggccaaggaaatcgttaaggccgctggccttagtgggattcgt
gcaggcttgtatgtgggcgatgcaccggctgtagagtcgcaaacggtcgccgaattgagt
gacggcagttattcggtgattaccgaccgcaatgccctgcgtgaaaatccgccggatatt
ctgctgaccaactacaagatgttggactttcttctgctgcgtgcagcagatgcccctttg
tgggcgcatcagcagccggacacgctgcgttatttggtggtggatgagctgcataccttt
gacggtgcgcagggtactgatctggcctgtttgattcgccgtctcaagggacgtctgaag
gcgccgccgggccagttggtgtgcgtcggtacttcggcaacgctgggcgacgatggggtt
agcgatttgctggcctttgccggtgatgtgtttggtgaagtgttggatgacagtgcggtt
atcgccgaggaccgcgagtcggttggggattatctcgctgaagccctggttgagttcacc
caaagcccgcagcccagtgatctggataccttggcccccgagaactttgacgacctgcat
gcctatctggcggcccaagcacccttgtggttcggtgagccttgctcggtcacgcaggca
gaggattttgcttggcgctgtggcttgggtaaggacctgaagagccactttgctttccag
aatcttttgcgtgatttggagcgtcttgggccaaagtccgtgttgctggatgacctgttg
gtattgctcaagcgccgtttgccgagctgcgatgatgagcgctttgcgctgctatggttg
tctagcctgctctcgttggtggcgcatgcacgccaggatgcacatcagaactttttcttg
caggtgaaggtggaaatctggctacgtgagctgcgccgcatggtggctgtgctggatgct
gaaccgcagcttcggcatcacgatgacttgcgtaaagccgatatggaccggctgcatctg
ccggtgatccattgtcgcgagtgccacgccaccggctggggttctacgcaacaaaagatc
agtcccaatcaactgacccatgacctgcaggcgttttacagcgcgttcttcgccgaggat
gtgagcactcgttttatttttccttccagcgcgggggcgaaccctgcagtgttccagcgc
aagcaggtatgtcctgcgtgcggcaccttgcatcaggcatcgcaaaccgaatgctcacac
tgtgaggatcagcctttgctggctgtagatattgccagcaacctgcgtgaaggtacgcgc
aatggcgcgaagtacaccaagtcgcaccatgattgtcctttctgtgccggttataaaacg
ctgacgattgttggttcgcaagcggccagtctggctgcggtgatggtgggacagttgttt
gcaacgcgcttcaatccagacaagaagctgattgctttctctgactcggtacaggatgcg
gcgcatcgtgcagggttccttgccgcacgaacttggcgaatgaacttacgcccggcgttg
gcgcaggtaattgctgatgcctatgcagctgggcgacctgtgacattggaaaatttgcca
acagcattcgcgcaacgttggcgcacggcgctaggtgatggtcattacattgctaacttc
ctgccaccgcaaatgcagtggctacgtgattacgagactctgatggaagagggggcgctg
cctgaaagcagcaacctacctggcgagttggcgagggtgttgccttgggtgctcaatgca
gaatttggccaggatgctcatattggtcgtactctggtagcgacgggaactgcttgcgta
gtgccacttgcaggcaagttagacgaagccgctcaatggctgttgccacgtctacgtgac
acgcttgaaccgttagccgccgcgcagctggacgaagttgttgttttactgcgcgggcta
ctggaaaacatgcagcgcatcggggcttggcgtgatcaggagctagggttttatgcgcga
atgggtagcagtccttgggggtataagaagaatccaagccagtttaagcttctaaccagc
cctcggcctccgaggtttttgacactggcagagtttggtcgctgcgtcagtgtaactaag
agccatgcccgtttgtttagcgactgggcgttcaaggcattgcctgctttgcatgaactg
gcgctgggcacggatgccttgattgcacccctttatcggcttgctcttgaggcattggaa
agcgttggcttagcaggttttgaggaggccaccgagaagccggatatacgtgtatggggg
ctggagccctctgctttccacgttatcttggggggcaaggtgtggcggtgtgcctgctgc
cacagcacaacactctctggcccagaggatgatttttctgagcaagcgtgtcgccgcgtc
gattgccggggcgagttgcacgcactagatgtacccggtgacttttatcgcaagctctat
ctgaatgcggacattcggcgggtggtagcgcatgagcataccggcttgctgccgcgcgaa
acgcgcgaggcggtagagcgcaactttaaatccaacagtgatcgccccgggggcattaat
gtgctctccgcgacacccactcttgagatgggtatcgatattggcgacttgtccagcgtg
ctgcaatgttcggttcctccacagcaggctaactacattcagcgagccggtcgggcaggg
cgtagcacgggtaatgcgttgctgatgagcatggcgaccagcaagccgcatgacctgtat
ttttggaatgaccctaaaaccatgattgcaggttccgtgcaggcacctggggttttcctt
aacgcctcggcggtacttgagcgtcaacttacagcgttcactctagattgctgggtgcat
gagaacgggcgggcggcgcagatccctccggaaattcgtggggtgttcactgcgatcaat
aatcagaccacgagcaaatttccttacccttggttgagctatgtggaacagcaccaggca
tcgctacttgagcggttcctgcgcttgttcaatcaaggggagttgtgccctttgagcgac
ggtacgtgccaatggctcgcaaatttcattcagggcagcagcggtgatagcagtccgttg
gcgtacaagatcgtcaaccgtttgcagggcattgctagtgatgttgaaagcatcaagcgc
aaacgtgaagccgcagtgaaggagatcgataagctgcaggcattgacggtgcgtggtgag
gatcaggatctggagttggcgcgactgcttcaagatcgaactgcgctttcgcgtttgatt
ggcagcattgagggtaaggctacgctcaatgtgctgactgatgagggcttgctacccaac
tatgcgttcccggagcaaggtgtgctgttgcgctcgatcattgtgcgcgattcaaagcct
ggaacatccgctcctgatcctctgaccttcgaatatgagcgtcctggatcaacggccatc
actgagttggcaccgaacaacaccttttatgccgaaggtcggcgggtggtgatcaaccag
atcgacgtatcgaagatcaagcctgagcattggcgtttctgtaggcagtgctcctatacc
gagccgctgtcgtcaggtgatcaacaccctaactgcccacgatgtggcgatacgctgtgg
cgcgacagtgggcgcgtacacgagatgctgcgcttgaccacggtatttgcccgcacgctg
gatcgcgatagccgtattgctgacgattcagacgagcgtcagcgcggcttttatgtgcgc
caggctttggtggatagcccgcctgatgcggtgcgtcaggcctttgtgattgacgagcag
acatttcctttcggcttcgagtttctcgatcgggtgacttttcgcgaggtgaactttggc
gagcagtcagcggaaggcatgccgatggagatcggcgggaaggaactcagccgccctggt
ttcagcatctgccccgagtgcggcaccttgcagcgcaagcgcaaggccgaggagctgtat
cgcaaccattcgtcctggtgcgcgaagcgcaagaaccccgaggcgagcacgcagcaatgt
gtgttcctctaccgcgagttcactagtgagggcattcgtctgtttttgcccgaggtgggt
tttgccgataccaacgaggccttgctgagctttgtgtcggctctggagttgggggtggcg
cggcgttttaggggagcagtggaccatctacgtattgccctagatatgcgtatggctgcg
ggctctgagacgccgcgatgctatctggtgatctacgatagtgttccaggaggtactggc
tatctcaaagagctgatgcgtgctcccgagccgttgctggaggtgttcgagaaagctcta
gaggcccttaacagctgcacttgcaaccagaatgcggacaccgatggctgttatcgctgc
gtgtaccgctatcacaacagccatgatcgtaagtctatctcgcgacgtacagcacagaag
ttgttgggtgaggtgatgcagtacaagggtgcactgaagccagttacccatctggccgac
gcccagccagctaaccagttactggacagcatgctggagaagcggtttgtcgaagcgctg
cgccgtgagcatgaaggtgagaagttcaagctgagtgagctgttgttcaagggcaaggcg
ggctatcagatacaggctggctcgcgtcgctggcggatggagttgcaggtcaatctggga
gccagcgaaggtgtgttgatttcttgcaagcctgacttcgtgttctggccagacgatgcc
gccgacgacctgcccgtggcggtctttgttgatggttggcagtaccacaaagacatcatt
actaccgatatggccaaacgtatggcggtggccaagagcggaaagttctcagtctggacg
ctgacctgggatgatgtcgaatgcgctttgcaaaaccaggtattacctacgccatcgcct
tgggcaactttgcttaatgatgatccgcagcaggtagtgcagaagctgtgcgcggcacag
ggcatcgcaacactctccaatttcaaatcgttgccgtcctttagccagctgcatcagcgt
ttagcccatgggcaacaccaagtgctcggcaaattggccgtctccctggctacgggaatg
ttgatgccgccgggggacactactgcgcttcaagtcctgcgcggaggggctttctggcag
cgtttggatgagctgggtctgctacctgacctgcaaatgcataggttgagccagcgtcag
ctcggtacagcctggatgctggccattgccatgcacccggagcatctgaagcaagtgatg
aggggcaatggctctgcagactctgaacctgttctggttggcgagtggaaagaagatggt
ctgcccgaaagcgagcttcagttacgctggcagcaactttggcaggcacttaacttattg
ttgccgctgagtcagatttgggttggcaacgctgaaatgccagggttacctgcgctgcag
gattgttctgcgctcaaagcaaaatccggcgggctgtctgaggcctggcaggaagcgctg
agtctagctgcacatgaagtacagtcttggggcttggctctggctggtctcgacgtgacc
gctccagaggtgggctatgagttgatggatgaaaaaggccgcgtaatagcagaagctgag
ttggcttggccagatgttcgtaccgcggtactactgccagattctgaagcagaggctgcg
ctttttgctggccaaggttggcattctttcaccgctgacggcagtgagttgcctgatgag
ctgagaacccttttgatggagacactggcatga
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