Pseudomonas sp. UW4: PputUW4_00708
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Entry
PputUW4_00708 CDS
T02357
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppuu
Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppuu03016
]
PputUW4_00708 (truB)
Enzymes [BR:
ppuu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PputUW4_00708 (truB)
Transfer RNA biogenesis [BR:
ppuu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PputUW4_00708 (truB)
Prokaryotic type
PputUW4_00708 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AFY17915
LinkDB
All DBs
Position
848059..848976
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLASGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLQERPVTVGRTDIEAVLPKFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTITRLELLAFEGDTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLQFSEASAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggcattatccttctcgacaagccg
ctggggttcacctccaacgcggccttgcagaaggttcgctggttgctgaacgccgaaaag
gcaggtcataccggtagtctcgatcccttggcctccggcgtgttgccgctgtgcttcggc
gaggccaccaagttctcgcaatacctgctcgattccgacaagggttacgaaaccctggcg
caactgggcaagaccaccaccacggcggatgccgaaggtgaagttttgcaggaacgcccg
gtgaccgttggtcgcaccgatatcgaggctgtgctgcccaaatttcgtgggcaaatcagt
cagataccgccgatgtactcggcgctcaagcgtgatggccagccgctgtacaagctggct
cgtgcaggcgaagtagtggagcgcgaaccgcgttctgttactattacgcgcttggaattg
ctggccttcgaaggagatactgcgcggctggcggtggattgcagcaaaggcacctatatc
cgtaccctggtggaggatatcggtgagcaactcggttgtggcgcttacgttgcagaactg
cgacgtacccaggccgggccattcaccctggcgcagacggttactctcgaagagctggaa
gcggtacatgccgaaggcggcaacgaagcggtcgatcgcttcctgatgccatcggacagc
ggcctgctggattggccactgttgcagttctcggaagcgagtgcgttctactggctcaac
ggccagccggtacgtgccccggatgcaccgaagttcggcatggtgcgggtacaggatcac
aatggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcagaatga
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