Pseudomonas sp. UW4: PputUW4_00743
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Entry
PputUW4_00743 CDS
T02357
Symbol
nikA1
Name
(GenBank) nickel ABC transporter periplasmic nickel-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu02010
ABC transporters
ppuu02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PputUW4_00743 (nikA1)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PputUW4_00743 (nikA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppuu02000
]
PputUW4_00743 (nikA1)
Transporters [BR:
ppuu02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
PputUW4_00743 (nikA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
DUF6381
Motif
Other DBs
NCBI-ProteinID:
AFY17950
LinkDB
All DBs
Position
complement(894360..895955)
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AA seq
531 aa
AA seq
DB search
MKMLPLRAAIAAALLSVAVGVSAKPLVVCTEASPEGFDMVQYTTAVTADAVAETIFNRLA
DFKPGTTEVIPALADSWDISEDGLSYTFHLRKGVKFHTTEYFKPTRDMNADDVVWSFQRQ
LDPNHPWHKLSSVGFPYFESMGFKELLKSVEKVDDNTVKFTLTRREAPFLADIAMAFSSI
YSAEYADQLLKANKAGDLNNKPVGTGPFVFQRYNKDAQVRFKANPDYFRGKPPADALILA
IATDNNVRLQKLKANECQVALYPKPDDIPSIKKDSNLKVDELNAMTVSYIAMNTTHKYMS
DVRVRKAIDIAFDKEAYVNALFGKGNATAGVNPYPDTLLGYNHDLKNPARDLDKARALLK
EAGVPEGTTFTLFTRNGGGPTNPNPMLGTQMMQADLAKVGIKIDIRVMEWGEMLKRAKNG
EHDMVSAGWAGDNGDPDNFLTPMLSCEAAKNGENYARWCNDKFQALIDQAREKTDPAERA
ALYEQAQVIFNQDQPWISMAHTRMFTAMRNNVEGYHISPLTTNNFATTQVK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcttcccctacgtgcggccatcgcggctgctttgctcagtgtcgctgtcggc
gtttcggccaagcccctggtggtttgcaccgaagccagccctgaaggcttcgacatggtt
cagtacaccactgcagtcaccgccgatgccgtggccgaaaccatcttcaatcgcctggcg
gacttcaagcccggcaccactgaagtgattccggcactggccgactcctgggacatcagt
gaagacggcctgagctatacgtttcatctgcgcaaaggcgtcaagttccacaccaccgaa
tacttcaagccgacccgcgacatgaatgccgacgacgtggtctggagcttccagcgtcag
ctggacccgaatcatccatggcacaaactgtcgagcgtgggcttcccgtactttgaaagc
atgggcttcaaagagctgctcaaaagcgtcgagaaagtcgacgacaacacggtcaagttc
accctgacccgacgcgaagcgccgttcctggccgacatcgccatggccttctcgtcgatc
tactccgccgagtacgccgatcagttgctcaaggccaataaggccggcgacctgaacaac
aagccagtcggcaccggcccgttcgtcttccagcgctacaacaaggacgcccaggttcgc
ttcaaggccaacccggattacttccgtggcaagccaccagccgatgcgctgatcctggcc
atcgccaccgacaacaacgtacgcctgcagaagctcaaggccaacgagtgccaggttgcg
ctgtatccgaaaccggatgacatcccgagcatcaagaaagactcgaacctgaaggtcgac
gaactgaacgcgatgaccgtttcctacatcgccatgaacaccacgcacaagtacatgagt
gatgtgcgggtgcgcaaagccatcgacatcgccttcgacaaagaggcgtacgtcaatgcg
ttgttcggcaaaggcaatgcaacggccggggtcaacccgtacccggacaccctgctgggc
tacaaccacgacctgaagaacccggcccgtgacctggacaaggcgcgcgccttgctcaag
gaagccggcgtaccggaaggcaccaccttcaccctgttcacccgcaacggtggcggtccg
accaacccgaacccgatgctcggcacgcagatgatgcaagccgacctggccaaggtcggg
atcaagatcgacatccgcgtgatggaatggggcgagatgctcaaacgcgccaaaaacggc
gagcacgacatggtttccgccggatgggcgggcgataacggcgacccggataacttcctt
acgcctatgctcagttgtgaagcggccaagaacggagaaaactacgcgcgctggtgcaat
gacaaattccaggcgctgatcgaccaggcccgggaaaaaaccgatccggccgaacgtgca
gcgctctacgagcaggcccaggttatttttaaccaggaccagccatggatcagcatggcg
cacactagaatgtttaccgcgatgcgcaacaacgtagagggctatcacattagccccctc
accacgaacaacttcgccaccacccaggtgaagtag
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