Pseudomonas sp. UW4: PputUW4_00936
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Entry
PputUW4_00936 CDS
T02357
Symbol
rlmN
Name
(GenBank) Ribosomal RNA large subunit methyltransferase N
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
ppuu
Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppuu03009
]
PputUW4_00936 (rlmN)
Enzymes [BR:
ppuu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
PputUW4_00936 (rlmN)
Ribosome biogenesis [BR:
ppuu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PputUW4_00936 (rlmN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
AFY18143
LinkDB
All DBs
Position
1104044..1105192
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AA seq
382 aa
AA seq
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MTTSTVKTNLLGLTQQEMEKFFDSIGEKRFRAGQVMKWIHHFGVDDFDAMTNVSKALREK
LKAVAEVRGPEVVSEDISSDGTRKWVVRVASGSCVETVYIPQGKRGTLCVSSQAGCALDC
SFCSTGKQGFNSNLTAAEVIGQVWIANKSFGSVPATVDRAITNVVMMGMGEPLLNFDNVV
AAMHLMMDDLGYGISKRRVTLSTSGVVPMIDELSKHIDVSLALSLHAPNDALRNQLVPIN
KKYPLKMLLESCQRYMSSLGEKRVLTIEYTLLKDVNDKLEHAVEMIELLKNIPCKINLIP
FNPFPHSGYERPSNNAIRRFQDQLHHAGFNVTVRTTRGEDIDAACGQLVGQVLDRTRRSE
RYIAVRELNADSDVASSTANNN
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgactacatcgactgtaaaaactaacctgctgggtctgactcaacaggaaatggaaaaa
ttcttcgactcaatcggggagaagcgtttccgtgccggtcaggtaatgaaatggattcac
cactttggtgtcgatgatttcgatgccatgacgaacgtcagcaaggccttgcgcgaaaag
ctcaaggctgttgctgaggtccgtggtccggaagtggtcagcgaggacatctccagcgac
ggcacccgcaagtgggtggtgcgcgtggcgtccggcagctgcgtcgagaccgtttacatt
ccccagggcaaacgcggcactttgtgcgtttcgtcccaggcaggctgtgccctggattgc
agtttctgctccaccggcaagcaaggcttcaacagcaacctcaccgccgccgaagtcatc
ggccaggtgtggattgccaacaaatcctttggcagcgtcccggcaaccgtcgaccgtgcc
atcaccaacgtggtgatgatgggcatgggtgagccgctgctgaacttcgacaacgtcgtc
gcggccatgcacttgatgatggacgacctgggctacggcatttccaagcgccgcgtgacc
ctgtcgacctccggcgtggtaccgatgatcgatgagctctccaagcacatcgacgtctcc
ctggcgttgtccctgcacgcaccgaatgacgcattgcgtaaccaattggtgccgatcaac
aagaagtatccgcttaagatgctgctcgagtcgtgccagcgctacatgtcgtccctgggc
gaaaagcgtgtgctgaccatcgagtacaccttgctcaaggacgtcaacgacaagcttgag
cacgccgtggaaatgatcgagctgctcaagaacatcccgtgcaagatcaacctgatcccg
ttcaacccgttcccgcattccgggtacgagcgtccgagcaacaacgccattcgtcgtttc
caggatcagcttcatcatgccggtttcaacgtcaccgtccgcaccacccgtggtgaagac
atcgacgccgcctgtggtcaattggtagggcaggtgctggatcgcacccgtcgcagcgaa
cgttatatcgccgtgcgtgaattgaacgccgacagcgatgttgcttcgagcactgcgaac
aacaattaa
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