KEGG   Pseudomonas sp. UW4: PputUW4_00958
Entry
PputUW4_00958     CDS       T02357                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ppuu  Pseudomonas sp. UW4
Pathway
ppuu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ppuu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PputUW4_00958 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppuu03019]
    PputUW4_00958 (rnc)
   03009 Ribosome biogenesis [BR:ppuu03009]
    PputUW4_00958 (rnc)
   03036 Chromosome and associated proteins [BR:ppuu03036]
    PputUW4_00958 (rnc)
Enzymes [BR:ppuu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     PputUW4_00958 (rnc)
Messenger RNA biogenesis [BR:ppuu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PputUW4_00958 (rnc)
Ribosome biogenesis [BR:ppuu03009]
 Eukaryotic type
  90S particles
   RNase
    PputUW4_00958 (rnc)
 Prokaryotic type
  rRNA processing factors
   PputUW4_00958 (rnc)
Chromosome and associated proteins [BR:ppuu03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     PputUW4_00958 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm
Other DBs
NCBI-ProteinID: AFY18165
LinkDB
Position
1129629..1130318
AA seq 229 aa
MSVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
LAREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMEVARERVLAWLAGEFEGLTLVDTNKDPKTRLQEFLQSRGCELPRYEVVDIQG
EPHCRTFFVECEIILLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgagcgtctccttaagccgtctagagcgtcagctcggctacaccttcaaggatcaggaa
ctgatggtcctggccctgactcaccgcagttttgccgggcgtaacaacgagcgcctggaa
ttcctcggtgacgccatcctcaacttcgtcgccggcgaggcgttgttcgagcgtttcccg
ctggcccgcgaaggccagttgtcgcgtttgcgcgcacgcctggtgaaaggtgagaccctg
gccgtactggcccgtggtttcgatctgggcgagtacctgcgcctgggctcgggcgagctg
aaaagcggcggtttccgtcgcgagtcgattctggccgatgccctcgaagcgctgatcggt
gcgatctacctcgacgccggcatggaagtggcccgcgagcgtgtgctcgcctggctggcc
ggagagttcgaaggcctgacgctggtcgacaccaacaaagatccgaagacccgcctgcaa
gagttcctgcagtcccgtggttgtgagctgccgcgttacgaagtggtggatatccagggt
gagccgcattgccggacgttcttcgtcgaatgcgaaatcatcttactgaatgaaaaaagc
cgaggtcagggtgtgagccgtcgtattgccgaacaggtagcggccgccgcagcactgatt
gccctgggtgtggagaatggcaatgactga

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