Pseudomonas sp. UW4: PputUW4_01048
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Entry
PputUW4_01048 CDS
T02357
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PputUW4_01048 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppuu01007
]
PputUW4_01048 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppuu03016
]
PputUW4_01048 (lysS)
Enzymes [BR:
ppuu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PputUW4_01048 (lysS)
Amino acid related enzymes [BR:
ppuu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PputUW4_01048 (lysS)
Transfer RNA biogenesis [BR:
ppuu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PputUW4_01048 (lysS)
Prokaryotic type
Other AARSs
PputUW4_01048 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
MobA_MobL
Motif
Other DBs
NCBI-ProteinID:
AFY18255
LinkDB
All DBs
Position
1246223..1247725
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AA seq
500 aa
AA seq
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MSDLELDPQALQQEENSLIALRKEKLAAERAKGNAFPNDFRRENYCEQLQKQYADKTKEE
LAEAAIPVKVAGRIMLNRGSFMVIQDMTGRIQVYVNRKTLSEETLAAVKTWDMGDIIAAE
GTLARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFR
VRSQVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLK
RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLV
LGSTDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAGAKVLGF
EGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARRNDENPNVTDRFELFIGGREIAN
AYSELNDAEDQAERFMAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML
LTNSPSIRDVILFPHMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctagaactcgatccgcaagccctgcaacaggaagaaaactccctgatcgcc
ctgcgcaaggaaaagcttgctgccgagcgcgccaagggcaatgccttcccgaatgacttc
cgccgcgaaaactactgcgaacaactgcagaaacagtatgcggacaagaccaaggaagag
ctggcagaggctgcgatcccggtcaaggttgccggtcgtatcatgctcaaccgtggctcg
ttcatggtgatccaggacatgaccggtcgtatccaggtctacgtcaatcgcaagaccctg
tccgaagaaaccctggccgcggtgaaaacctgggacatgggcgacatcattgccgccgaa
ggcaccctggcccgttccggcaagggtgacctgtacgttgaaatgaccaacgtgcgcctg
ctgaccaaatccctgcgcccgctgccggacaagcaccacggcctgaccgacaccgaacag
cgctaccgccagcgctacgttgacctgatcgtcaacgaagacgtgcgccagacgttccgc
gtgcgttcgcaagtcatcgcccacatccgcagcttcctgatgaagcgtgacttcctggaa
gtggaaacgccgatgctgcagaccattccgggcggcgcggcagccaagccgttcgaaacc
caccacaacgcgctggacatggaaatgttcttgcgcattgcgcctgagttgtacctcaag
cggcttgttgtcggcgggtttgaaaaagtgttcgagatcaaccgcaacttccgtaacgaa
ggcgtttcgactcgtcacaaccctgaattcaccatgttggagttctaccaggcctacgcc
gactacgaagacaacatggacctgaccgaagagttgttccgtgaactggcgcagctggtt
ctgggcagcaccgacgtgccgtacggcgacaaggtgttccacttcggcgagccgttcgtg
cgcctgtcggtattcgactcgatcctcaagtacaaccccgagctgaccgctgacgacctg
aacgacatcgacaaggctcgcgccattgccaagaaagccggcgccaaggtgctgggcttc
gaaggcctgggcaagctgcaggtgatgattttcgaagagctggtcgagcacaagctggaa
cagccgcacttcattacccagtatccgttcgaagtgtcgccactggcacgtcgtaacgac
gagaacccgaacgtcaccgaccgattcgagctgttcatcggtggtcgtgaaatcgccaac
gcctactccgagttgaacgacgcggaagaccaggccgagcgcttcatggcccaggtggcc
gacaaggacgccggcgacgacgaagccatgcactacgacgctgacttcgtgcgtgcgctg
gagtacggcatgccgccaacggcgggtgaaggcatcggtatcgaccgtctggtgatgctg
ctgaccaactccccgtcgatccgcgacgtgatcctgttcccgcacatgcggccgcaagcg
taa
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