Pseudomonas sp. UW4: PputUW4_01140
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Entry
PputUW4_01140 CDS
T02357
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppuu
Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppuu03009
]
PputUW4_01140
Enzymes [BR:
ppuu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PputUW4_01140
Ribosome biogenesis [BR:
ppuu03009
]
Prokaryotic type
ribosomal protein modification factors
PputUW4_01140
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
AFY18347
LinkDB
All DBs
Position
complement(1343905..1345242)
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AA seq
445 aa
AA seq
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MSTTPAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRDVHPSVLAVTGPQQYEQVVNAVHEVVP
PRQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKNWREICPD
LIIRSTFIVGFPGETEEDFQYLLNWLTEAQLDRVGCFQYSPVEGAPANDLDLEIVPDDVK
QDRWERFMAHQQAISSARLQMRIGREIEVLVDEVDEQGAVGRCFFDAPEIDGNVFIDNGS
NLKPGDKVWCKVTDADEYDLWAEQI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactcctgcgccggccaatccaaaggttggcttcgtatccctgggttgcccc
aaagcactggtcgactccgagcgcatccttacccagctgcgcatggaaggctatgacgtc
gtgtccacctaccaggacgccgacgtcgtggtggtcaacacctgcggcttcatcgattcg
gccaaggcggagtccctggaagtgatcggcgaagccatcaaggaaaacggcaaggtcatc
gtgaccggctgcatgggcgtcgaagaaggcaacattcgcgacgtacacccaagcgtgctg
gccgtgaccggtccgcagcagtacgagcaagtggtcaacgccgtgcacgaagtcgtgccg
ccgcgccaggaccacaacccgctgatcgacctggtgccgccacaaggcatcaagctgact
ccgcgccactacgcctacctgaagatttccgaaggctgcaaccacagctgcagcttctgc
atcatcccgtcgatgcgcggcaaactggtcagccgtccggtgggcgacgtgctcgacgag
gcccagcgcctggtcaagtccggcgtcaaggagctgctggtgatctcccaggacaccagc
gcctacggcgtcgacgtgaaataccgcaccggtttctggaacggcgcgccggtgaaaacc
cgcatgaccgaactctgcgaagccctgagcaccctcggcgtctgggttcgcctgcactac
gtttacccgtacccgcacgttgacgaactgatcccgctgatggccgccggcaagatcctg
ccgtacctggacatcccgttccagcacgccagcccgaaggtgttgaagtcgatgaagcgc
ccggccttcgaagacaagaccctggcacgcatcaagaactggcgcgaaatctgcccggac
ctgatcatccgttcgaccttcatcgtcggtttcccgggcgaaaccgaagaggacttccag
tacctgctgaactggctgaccgaagcccagctcgaccgcgtcggctgcttccagtactcg
ccggttgaaggcgcaccggccaatgacctggacctggaaatcgtccccgacgacgtcaag
caggaccgttgggagcgcttcatggcgcaccagcaggccatcagctcggcgcgcctgcaa
atgcgcatcggccgcgagatcgaagtgctggtcgatgaagtcgacgagcaaggcgccgtg
ggccgctgcttcttcgatgccccggaaatcgatggcaacgtattcatcgacaacggcagc
aacctcaagccaggcgacaaggtctggtgcaaggtgaccgacgccgacgaatacgatctg
tgggctgaacagatctaa
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