Pseudomonas sp. UW4: PputUW4_01194
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Entry
PputUW4_01194 CDS
T02357
Symbol
hepA
Name
(GenBank) ATP-dependent helicase HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ppuu
Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppuu03021
]
PputUW4_01194 (hepA)
Transcription machinery [BR:
ppuu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PputUW4_01194 (hepA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AFY18401
LinkDB
All DBs
Position
complement(1404779..1407625)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DSITHFEGWKLTVREVDDIDGLLVYHGLNGQNEVVTLPETQLSNFIQFRLASDRLFAGQI
DPLPWFSLRYHTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
SNPFEDTQLALVALEWLVDDEKAQDALFAAGWDLLVVDEAHHLVWHEDQVSPEYSLVEQL
AETIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLQAFRAESENYRPVAEAVQELLDQ
GRLSPQAHKTIHGFLGNEGEALLAAVNDGDTEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHPYPLPCPDEYLELPLGDHAELYPEVSFQAQPDASEEERWWKFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFSHHLVLFDLPSHPDLLEQRIGRLDRIGQKHIIELHVPYLETSP
QERLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLEEADDGEWQALIDEARTERERLE
AELHTGRDRLLELNSGGAGEGDALVEDILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDTNGNDLSARVSF
ETLNDQLESVPRASANKFIQAQRDQLAPRINAGEAKILPRHTERVAEAQRRLAADTDEEL
ARLTALQAVNPTVRDSELVALRKQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagtgacagcgaagccgagctgggt
ttaggcaccgttctggcacaggacggccgcttgttgaccgtgctctacccggccactggc
gacacccgccagtacgcgctacggaatgcgcctctgacccgcgtgcggttttcgccgggt
gactccatcactcacttcgaaggctggaagctgaccgtccgcgaggtcgatgacattgat
ggcctgctggtttaccacggcctcaacgggcagaacgaagtggtcaccctgccggaaacc
cagctgtcgaacttcatccagttccgcctggccagcgatcgtctgttcgccggccagatc
gacccgctgccctggttctccctgcgttatcacactctggaacacaccagccgtcagttg
cagtcctccctttggggcctgggcggcgtgcgtgcgcaaccgatcgcgcaccagttgcac
attgcccgcgaagtcgccgaccgtatcgcgccgcgggttctgctggccgacgaagtgggc
ctgggtaaaaccatcgaagccggcctggtgatccatcgccagttgctctcgggccgcgcc
agccgtgtgctgatcctggttccggagaacctgcagcaccagtggctggtcgagatgcgt
cgtcgtttcaacctgcaggtcgcgctgttcgacgaagagcgtttcatcgaaagcgatgcc
agcaacccgttcgaagacacccaactcgcgctggtcgcgcttgagtggctggtggacgac
gagaaagcccaggacgcgctgttcgcggcaggctgggacttgctggtggtcgacgaggct
caccacctggtgtggcacgaagatcaggtcagccctgaatattcgctggtcgagcaactc
gccgaaaccattcctggcgtactgctgttgaccgccaccccggaacaactgggccaggac
agccacttcgcccgtctgcgcctgctcgacccgaaccgtttccatgacctgcaagccttc
cgcgccgagagcgaaaactatcgcccggtggccgaagccgttcaggagttgctggatcag
ggacgcctgtcgccacaagcccacaagaccatccacggtttcctcggtaacgaaggcgaa
gccctgctggccgccgtcaacgatggcgacaccgaagccagcgcgcgcctggtgcgcgaa
ttgctcgaccgtcacggcaccggccgcgtactgttccgcaacacccgcgccgccgtgcaa
ggcttcccggaacgcaagctgcatccgtacccgctgccgtgcccggacgaatacctcgaa
ctgccgctgggcgatcacgccgagctgtacccggaagtcagcttccaggcccagccggac
gccagcgaagaagagcgctggtggaaattcgacccgcgcgtcgagtggctgatcgaccag
ttgaagatgctcaagcgcaccaaagtgctggtgatctgcgcccacgccgaaaccgccatg
gacctggaagacgccctgcgcgtgcgttccggcatcccggccacggtgttccacgaaggc
atgaacatcctcgagcgtgaccgcgccgccgcctacttcgccgacgaagagtttggcgcg
caagtgctgatctgctcggaaatcggcagtgaaggccgcaacttccagttctcccatcac
ctggtgctgttcgacctgccgtcccacccggacttgctggagcaacgcatcggtcgtctg
gaccggatcggccagaagcacatcatcgaattgcacgtgccatacctggaaaccagcccg
caagagcgcctgttccagtggtaccacgaagcgctgaacgcattcctcaacacctgcccg
accggcaacgccttgcagcaccagttcggcccgcgcctgctgccgctgctcgaagaagcc
gacgatggcgagtggcaagcgctgatcgacgaagcccgtaccgagcgtgaacgcctggaa
gccgagctgcacaccggccgtgaccgtttgctggagctgaactccggtggcgcgggcgaa
ggcgatgcactggtggaagatatccttgagcaggacgaccagttcgcgctgccgatctac
atggaaaccctgtttgacgccttcggcatcgacagcgaagaccattcggaaaacgccctg
atcctcaagccgagcgaaaaaatgctcgacgccagcttcccgctgggcgacgacgaaggc
gtgaccatcacttacgaccgcaaccaggcgctgtctcgcgaagacatgcaattcattacc
tgggagcacccgatggtgcagggcggcatggatctggtgctgtccggttccatgggcaac
accgccgtggcgctgatcaagaacaaggcgctgaagccgggcaccgtgttgctggaactg
ttgtatgtcagcgaagtggttgccccgcgctcgctgcaattgggccgctacctgccgccg
gccgccctgcgctgcctgctcgataccaacggcaacgacctgtcggcccgcgtgtcgttc
gaaaccttgaacgaccagctcgaaagcgtgccacgtgccagcgccaacaagttcatccag
gcccagcgtgaccaactggcgccgcgtatcaacgccggtgaggcgaagatcctgccgcgc
cacactgaacgtgttgccgaggcgcagcgtcgcctggccgccgataccgacgaagaactg
gcgcgcctgaccgcgttgcaagcggtcaacccgaccgtgcgcgacagcgaactggtggcc
ctgcgcaaacaacgcgagcaaggcctggccatgctcgacaaggctgcactgcgactggaa
gcgattcgggtgttggtggcgggttaa
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