Pseudomonas sp. UW4: PputUW4_01700
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Entry
PputUW4_01700 CDS
T02357
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
ppuu
Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppuu03000
]
PputUW4_01700
Transcription factors [BR:
ppuu03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PputUW4_01700
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AFY18905
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Position
complement(1995746..1996645)
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AA seq
299 aa
AA seq
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MLNYRQLHYFWVVAKTGSIVRACEQLNLTPQTISGQISLLEQTFGIELFRRVGRQLELTE
AGRQALPYAEQMFQLGGELELMLRAQPNEQQILFRVGVADVVPKSIVYRLIAPTMELSEP
LRITCREDKLERLLADLAIQRLDLVISDSPMPSHLDIKGYSQKLGECGISFFATPELAAR
FGQDFPRNLHGAPLLIPGPETVVRSRLQRWFAEQQIQPQIVGEFDDSALMQAFGQSGSGI
FIGPSVIADEVRRQYGVQVIGQTDAVSESFYAISVERKVKHPGIVAITEGARRELFTAL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgttgaattatcgacaactgcattatttttgggtggtggccaagaccggcagcatcgtg
cgcgcctgcgaacaactgaacctcacgccgcaaaccatcagcgggcagatttcattgctg
gaacagacctttggcatcgagttgtttcggcgcgtcggacgacaactcgaactgaccgag
gccggacgccaggcactgccctacgccgagcaaatgttccagctgggtggcgaactggaa
ctgatgctgcgggcacaacccaatgagcagcaaattctgtttcgtgtcggggtggccgac
gtggtgcccaagtccatcgtctatcgcctgattgcaccgaccatggagctgagcgaaccg
ctgcgcatcacctgccgcgaagacaagcttgaacgtttgttggccgacctggcgatccag
cgcctggacctggtgatctccgatagcccgatgccgtcgcacctggacatcaagggctac
agccagaaactgggtgagtgcgggatcagcttcttcgccacccctgagttggcggcacgc
ttcggtcaggacttcccgcgcaacctgcacggtgcgccactgctgattccaggtccggaa
accgtggtgcgcagccgtttgcagcgctggttcgccgagcagcagatccagccgcagatt
gtcggcgagttcgacgatagcgccctgatgcaggccttcggccaatccggcagcgggatc
ttcatcggtccgagcgtgattgccgatgaagtgcgacgccagtatggcgtgcaagtgatc
ggccagaccgatgcggtgagcgagtcgttctatgccatctcagtggagcgcaaggtcaag
caccccggcattgtcgccattaccgaaggtgcccgacgcgagctgtttacagcgctgtaa
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