Pseudomonas sp. UW4: PputUW4_01863
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Entry
PputUW4_01863 CDS
T02357
Symbol
glyA1
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00260
Glycine, serine and threonine metabolism
ppuu00460
Cyanoamino acid metabolism
ppuu00630
Glyoxylate and dicarboxylate metabolism
ppuu00670
One carbon pool by folate
ppuu00680
Methane metabolism
ppuu01100
Metabolic pathways
ppuu01110
Biosynthesis of secondary metabolites
ppuu01120
Microbial metabolism in diverse environments
ppuu01200
Carbon metabolism
ppuu01230
Biosynthesis of amino acids
ppuu01240
Biosynthesis of cofactors
ppuu04981
Folate transport and metabolism
Module
ppuu_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PputUW4_01863 (glyA1)
09102 Energy metabolism
00680 Methane metabolism
PputUW4_01863 (glyA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PputUW4_01863 (glyA1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PputUW4_01863 (glyA1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PputUW4_01863 (glyA1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PputUW4_01863 (glyA1)
Enzymes [BR:
ppuu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PputUW4_01863 (glyA1)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AFY19068
LinkDB
All DBs
Position
complement(2190648..2191904)
Genome browser
AA seq
418 aa
AA seq
DB search
MFSKHDQIKGYDDELLAAMNAEDARQEHHIELIASENYTSQRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDVVEQLAIDRARQLFGADYANVQPHSGSQANAAVYLALLQAGDTVLGMS
LAHGGHLTHGAKVSFSGKLYNAVQYGIDTATGLIDYDEVERLALEHKPKMIIAGFSAYSK
TLDFPRFRQIADKVGAYFFVDMAHVAGLVATGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANPELEKKLNAAVFPGGQGGPLMHVIAAKAVCFKEALEPAFKTYQAQVIRNAQAMAQ
VFIERGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAGITVNKNAVPNDPQSPFVTS
GLRIGTPAITSRGFKEAQSIALAGWICDILDHLGDADIEANVARQAAALCTDFPVYRD
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaaacacgaccagatcaaaggctacgacgacgaactgctggcggcgatgaat
gccgaggatgcgcggcaggaacaccatatcgaactgatcgcctcggagaactacaccagc
cagcgggtgatgcaggcccagggcagcggcctgaccaacaagtacgccgaagggtatccg
ggcaagcgttactacggcggctgcgagcacgtcgatgtggtcgaacaactggccatcgac
cgcgccaggcagctgttcggcgccgactacgccaacgtccagccgcactccggcagccag
gccaacgccgcggtttatctggcgttgctgcaagcgggcgacaccgtgctcggcatgagc
ctggcccacggcggccacctgacccacggcgccaaggtgagtttttccggcaagctgtac
aacgcggtgcagtacggcatcgacaccgccaccggcctgatcgattacgacgaagtcgag
cgtctggcactggagcacaagccgaagatgatcatcgccggcttctcggcctattcgaag
accctggacttcccgcgctttcgtcagattgcggacaaggtcggtgcgtacttcttcgtc
gacatggcccacgtcgccgggctggtggccacggggctgtacccgaacccgctgccctac
gccgacgtggtcaccaccaccacgcacaagaccctgcgcggcccccgtggcggtctgatt
ctggccaaggccaacccggagctggagaagaagctcaacgccgccgtgttccccggcggc
cagggtggcccgctgatgcacgtgatcgcggccaaggccgtgtgcttcaaggaagcgctg
gagccggcattcaagacttatcaggcgcaggtgatccgcaatgcccaggccatggcgcag
gtgtttatcgagcgcggttatgacgtggtgtccggcggtaccgacaaccacctgttcctg
gtcagcctgatccgccagggcctgaccggcaaggacgccgacgctgccctcgggcgtgcc
ggcatcaccgtgaacaagaacgccgtgcccaatgatccgcaatcgcccttcgtgacctcc
ggcctgcgcatcggtacgccggcgatcaccagccgtggcttcaaggaagcgcaaagcatc
gccctggccggctggatctgcgacatcctcgatcacctgggcgatgccgacatcgaagcc
aatgtcgcccgccaggcggccgccctgtgcacggacttcccggtctatcgcgactga
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