Pseudomonas sp. UW4: PputUW4_01997
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Entry
PputUW4_01997 CDS
T02357
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
ppuu
Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppuu03000
]
PputUW4_01997
Transcription factors [BR:
ppuu03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PputUW4_01997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_23
MarR_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AFY19201
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All DBs
Position
2333711..2334607
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AA seq
298 aa
AA seq
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MTIKQIRAFLAVAQSLSFAVACERLHLSQSALSLTIKALEEGLGGRLFTRNTRNVALTAE
GESLVPLARRLIADWDNVEDELRQRFTLQRGRVTLAAMPSFAGNLLPPILKTFRARYPNV
NVTVNDVINEQVLEMVRDRQVELGVAFEPTQSSPLQFTPLYIDRFVAVVPLDSALAELDD
IDWQTLLKEPFITLQRPSTVRVMLEEHLQARGMKLSVEFESHQLATVGRMVASGLGVSAV
PALCAGQMRELGARCITLRDPVVERALGVLTLPGGELSAAAQALFDVLKEEKFGEKLL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaccattaagcagatccgcgcctttctcgccgtggcccagagcctgagctttgccgtg
gcctgtgaacgcctgcacctgtcgcaatcggccctgagcctgaccatcaaggcgctggaa
gagggccttggcggacgcctgttcacccgcaacacgcgcaacgtggcgctcaccgccgaa
ggcgaatccctggtgccgctggcgcgccggttgatcgccgactgggacaatgtcgaggac
gagctgcgtcaacgcttcaccctgcagcgcggtcgcgtgaccctggcggcgatgccgtcg
ttcgccggcaacctgctgccgccgatcctcaagaccttccgcgcccgttacccgaacgtc
aacgtgacggtcaatgacgtgatcaacgagcaggtgctggaaatggtccgtgaccgccag
gttgaactgggggtggcgttcgagccgacccagagttcgccgctgcaattcacgccgttg
tacatcgatcgattcgtggcggtggtgcccctggattcagcgctggccgaactcgatgac
atcgattggcagaccctgctcaaggagccgttcattaccttgcagcgaccttccaccgtg
cgggtcatgcttgaagagcacctgcaggcccgcggcatgaagctgtcggtggagtttgaa
agccatcaactggcgacggtcggacgcatggtcgccagcggcctgggtgtgagcgcggtg
ccggccttgtgtgccgggcagatgcgtgagctgggcgcgcgctgcattaccttgcgcgat
ccggtggtggagcgggcgcttggtgtgttgacgttgcccgggggggagctgtcggcggcg
gcgcaggcgttgtttgatgtgctgaaggaggaaaaatttggggaaaagcttctctga
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