Pseudomonas sp. UW4: PputUW4_02527
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Entry
PputUW4_02527 CDS
T02357
Symbol
kaiC
Name
(GenBank) circadian clock protein KaiC
KO
K08482
circadian clock protein KaiC
Organism
ppuu
Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
PputUW4_02527 (kaiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Rad51
RecA
AAA_16
DnaB_C
nSTAND3
AAA_5
IstB_IS21
SLFN-g3_helicase
PAXNEB
MEDS
CbiA
AAA_22
PhoH
AAA_24
NPHP3_N
AAA_7
ABC_tran
AAA_11
AAA_30
ResIII
AAA
AAA_19
GvpD_P-loop
Mg_chelatase
NACHT
DUF7504
Nop5_56-rel_N_Arc
DAP3
Motif
Other DBs
NCBI-ProteinID:
AFY19722
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Position
complement(2940251..2941852)
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AA seq
533 aa
AA seq
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MNARPGQGSSEKAARCGSSKWLPHCSWPQEESYLSLTNELNRTKAATGIEGLDDILDGGL
SRGHVFLLEGEPGTGKTTVALHFLLAGAQAGERSLYITLSETERELRQGALSHGWEMDDN
VHIFELTPPENLLNAEQQQTLLYSSDLELGEATRQIFEVVERVKPTRVVLDSLSEIRLLA
QSSLRYRRQILAIKHYFVRYDATVLLLDDLTTESLDKTVHSVAHGVIRLEELTPNYGAER
RRVRVVKYRGQKYRGGFHDFTITGDGVHVFPRLVAAEHRGQYLRQQLSSGIREMDALLGG
GIETGSSTLILGPAGTGKSLISMVFATAAVARGEKAALFIFDEELGLLFERMKNIGIDLQ
ALQDSGNLLVEQVDAAELSPGEFSHRVRRCVDEGNIKTVVIDSINGYQAAMPEENALVLH
MHELLLYLNRQGAATFMTVAQHGLVGDMQTPVDITYLADTVILLRYFEALGKVRRAISII
KKRTGSHESTIREYRISAQGMTIGEPLEAFQGVLRGVPTYLGASNPLLAEDIR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgctcgtccgggccaggggtcaagtgaaaaggcagcccgttgcggctcttcgaag
tggctgcctcattgttcctggccacaagaggaatcttatttgtctctaaccaacgaattg
aaccgtaccaaagccgccaccggtatcgagggcctggacgatatcctcgatggaggattg
tcccgcggtcatgtgtttttactcgaaggcgagccgggaaccggcaagaccacggtggcg
ctgcacttcctgttggctggcgcgcaagccggcgagcgttccttgtacatcacgctgtct
gaaaccgaacgcgagctgcgccaaggcgccttgtcccatggttgggagatggacgacaac
gtccacatcttcgagctgacgcctccggaaaacctgctcaatgccgaacagcagcagacg
ttgctttactcctccgaccttgaactgggcgaggccacccgccagattttcgaagtggtc
gaacgggtcaaaccgacccgcgtcgtcctggacagtctttccgaaattcgcctgctggca
caaagctcgctgcgttatcgtcggcagattctggccatcaaacattatttcgtgcgttat
gacgccacggtcttgctgctcgacgacctgaccaccgagtccctggacaagaccgtgcac
agcgtcgcccacggcgtgattcgcctggaagagttgacgcccaactacggtgccgagcga
cggcgcgtgcgcgtggtgaagtaccgcggccagaaataccggggcggctttcacgacttc
accatcaccggcgacggcgtgcatgtatttccgcgtctggtggccgccgaacatcgcggt
caatacctgcgccagcaattgagcagtggcatccgggaaatggatgcgctgctgggcggc
ggtatcgaaaccgggtccagcaccttgattctcggtccggccgggaccggcaaatcgctg
atctccatggtgttcgccaccgcggcggtggcccggggtgaaaaggccgcgctgttcatc
ttcgatgaagagctggggttgctgttcgagcgcatgaagaacatcggcatcgatttgcag
gccctgcaagacagcggcaatttgctggtcgaacaggtggacgccgccgagctgtctccc
ggagagttctcccaccgggtccggcgctgtgtcgacgaaggtaatatcaagaccgtggtg
atcgacagcatcaatggctatcaggcggcaatgccggaagagaacgccctggtactgcac
atgcacgagctgttgctgtacctcaatcgacaaggcgccgcgaccttcatgacggttgcc
cagcatggcctggtcggcgacatgcagaccccggtcgacatcacttacctggccgatacg
gtgatcctgctgcgttacttcgaagccctgggcaaggtacgccgggccatttcgatcatc
aagaaacgcaccggcagccatgaatcgaccatccgtgaataccgcatcagcgcccagggc
atgaccatcggtgaaccgctggaggccttccagggtgtactgcgtggagtgcccacctat
ctcggggccagcaaccccttgcttgcggaagatatccggtga
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