Pseudomonas sp. UW4: PputUW4_02578
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Entry
PputUW4_02578 CDS
T02357
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
ppuu
Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppuu03000
]
PputUW4_02578
Transcription factors [BR:
ppuu03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PputUW4_02578
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
MarR
Motif
Other DBs
NCBI-ProteinID:
AFY19773
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Position
3009529..3010404
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AA seq
291 aa
AA seq
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MTISHTQLKAFHAVAMNGSFTRAAEQLCLSQPAVSDQVRKLEDYYGVMVFYRDKRLVRLT
EVGERLFGLTQRLFDISVDAHDMLTDYRTLSTGTLNLAVDAPVHVLPYVSRFCSRYPGID
VKIETANTDEVLQRLFSHQADIALLGRNIEDDRLMSLHLRSDPMLAFVAQDHPWAQRDSI
CLADLHDTPMVLREQGSVTRLSLEEEMAAAGLHIRKAIEVEGREAAREAVAIGMGVGVVS
AAELGSDSRVRGLPIVDCQRHFTETLVCLRAQSSRRILTTFLDMVREGLDG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgacgatttcccatacccaactcaaggcgtttcacgccgtcgccatgaatggcagcttc
acccgggcggccgagcaactgtgcctgtcgcaacctgcggtatccgaccaggtgcgcaag
ctcgaggactattacggggtaatggtgttctaccgcgacaagcgcctggtacgcctgaca
gaggtgggcgagcggctgttcggcctgacccagcgcctgttcgatatcagtgtcgatgcc
cacgacatgctgacggactaccgcaccctgtcgaccggaaccctgaaccttgccgtggat
gcaccggtgcacgtcctgccttatgtctcacgcttctgcagccgttaccccggtatcgat
gtgaagattgaaaccgccaataccgatgaggtcctgcagcggttgttcagccaccaggcc
gacatcgctttgctggggcgcaacatcgaagacgaccgcttgatgtcgctgcatctgcgc
agcgatcccatgctcgctttcgtcgcccaggaccatccctgggcacaacgagattccatc
tgcctggccgacctgcacgacacgcccatggtcttgcgcgaacagggctcggtcacgcgc
ttatcgctggaagaggagatggctgcggcgggtttgcacatccgcaaggccatcgaagtg
gaggggcgtgaagccgcgcgcgaggcggtggcgatcggcatgggcgtcggggtcgtctcg
gccgccgaactgggctcggattcacgggttcgcggcttgccgatcgttgactgtcagcgg
cacttcaccgagaccttggtgtgcctgcgcgcacagagctcgcggcgtatcttgacgacc
tttctcgacatggttcgagaaggcctggacgggtga
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