Pseudomonas sp. UW4: PputUW4_02877
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Entry
PputUW4_02877 CDS
T02357
Name
(GenBank) Orn/Lys/Arg decarboxylase family protein
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00330
Arginine and proline metabolism
ppuu01100
Metabolic pathways
ppuu01110
Biosynthesis of secondary metabolites
Module
ppuu_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PputUW4_02877
Enzymes [BR:
ppuu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
PputUW4_02877
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AFY20072
LinkDB
All DBs
Position
complement(3380212..3382467)
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AA seq
751 aa
AA seq
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MYKDLKFPVLIVHRDIKADSVAGDRVRGIARELEQEGFSVVSAVNYTEGRLVASTYHGLS
CMLIASEDASTHSHLLQNMAELIGLARVRAPDLPIFALGEKVTLENAPADAMAELNQLRG
ILYLFEDTVPFLARQVARAARKYLDGLLPPFFKALVQHTADSNYSWHTPGHGGGVAYHKS
PVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADHTFFVINGTS
TANKIVWHSVVARDDLVLVDRNCHKSVLHSIIMTGAIPLYLCPERNELGIIGPIPLSEFS
RESIQAKIDASPLTKGRAPKVKLAVVTNSTYDGLCYNAELIRQQLGSSVEVLHFDEAWYA
YAAFHEFFAGRYGMGTSRDEGSPLVFTTHSTHKLLAAFSQASMIHVRDGGARQLDRDRFN
EAFMMHISTSPQYGIIASLDVASAMMEGPAGRSLLQEMFDEALSFRRALANLRQHIAADD
WWFSIWQPPSAEGIERVVTEDWLLQPEADWHGFGGVTDDYVLLDPIKVTLVMPGLTAGGA
LSERGIPAAVVSKFLWERGLVVEKTGLYSFLVLFSMGITKGKWSTLLTELLEFKRSYDAN
VSLASCLPCVAQENVARYQGMGLRDLCDQLHACYRSNATARHLKRMYTVLPEVAMKPADA
YDQLVRGEVEAVSIDALHGRIAAVMLVPYPPGIPLIMPGERFTESTRSIIDYLAFARTFD
SSFPGFVADVHGLQHEDQGTGRCYTVDCIKE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagatttgaaattcccggtcctgattgtccatcgcgacatcaaggccgacagc
gtcgccggcgaccgcgtgcgggggattgctcgtgagctggagcaggaagggttcagcgtc
gtttcggcggtgaactacaccgaaggacgactggtggcgtcgacgtaccatggcctgtcc
tgcatgctgatagcgtctgaggacgccagcacccattcccatttattgcaaaacatggcc
gaactgatcggtctggcgcgggtgcgtgcgccggatctgccgatcttcgccctcggcgaa
aaagtgaccctggaaaacgctcccgccgatgccatggccgagctcaaccagttgcgcggc
attctttacctgtttgaagacaccgtgccctttcttgcccggcaggtggcccgtgctgcg
cgcaagtaccttgatggcctgttgccgccattcttcaaggccctggtgcagcacaccgcg
gattccaactattcctggcacacccccggtcacggcggtggcgtggcgtatcacaaaagt
ccggtcgggcaggcgtttcaccagtttttcggggaaaacaccctgcgctcggatctttcg
gtgtcggtgccggagctcgggtccttgctcgatcacaccggccccctggctgaagccgag
gcccgtgcagcccgtaatttcggcgccgatcacacctttttcgtgatcaatggcacgtcc
acggccaacaagattgtctggcactcggtggtcgctcgcgatgacctggtgctggtggat
cgcaattgccacaagtcggtgctgcactcgatcatcatgaccggcgcgatcccgctgtac
ttgtgtccggagcgtaatgagctggggatcatcggcccgattcccctgagcgagttcagc
cgcgaatcgatccaggccaagatcgacgccagcccgctgaccaaggggcgtgcaccgaag
gtcaagctcgccgtagtgaccaattcgacctatgacggcctttgctacaacgccgagctg
atcaggcagcaactgggcagcagcgtcgaggtattgcacttcgacgaggcctggtacgcc
tatgcggcgttccatgagttttttgccgggcgctacggcatgggcacgtcccgtgatgaa
ggcagtccgttggtgttcaccacccattccacccacaagttgctggcggccttcagtcag
gcgtcgatgattcacgttcgcgacggcggcgcgcggcaactggaccgggatcgcttcaac
gaagcgttcatgatgcacatctcgacctcgccgcagtacggcatcatcgcctcgctggat
gtggcttcggcgatgatggaagggccggcggggcgttcgctgttgcaggaaatgttcgac
gaagccctgagttttcgccgggcgctggctaacttgcgccagcacattgccgctgatgac
tggtggttttcgatatggcaaccgccgtcggcagaaggcatcgagcgggtcgtcaccgag
gactggttgctgcagccggaggccgactggcacggctttggcggcgtgaccgacgattat
gtgctgctcgacccgatcaaggtcacgctggtgatgccggggctgacggccggtggcgcc
ctcagcgagcgcgggattccggcggcggtggtcagcaagttcctttgggagcgtggcctg
gtggttgagaagaccgggctgtattcgttcctggtgttgttctccatgggcatcaccaag
ggcaagtggagcacgctgctcaccgaattgctggagttcaagcgcagttatgacgcgaac
gtcagcctggccagttgcctgccttgcgtggcgcaggagaatgtcgcgcggtatcagggc
atgggcctgcgtgatctgtgcgatcagttgcatgcctgttatcgcagcaatgccaccgcc
aggcacctcaagcgcatgtacaccgtactgccagaggtcgcgatgaagccggcggacgcc
tatgatcaattggtgcgcggtgaagtcgaagccgtatcgatcgatgcgctgcacggacgg
atcgccgcggtgatgctggtgccgtatccgcccggcattccgttgatcatgccgggtgaa
cgctttaccgagtcgacccgctcgatcatcgattacctggcgtttgcccgcacgttcgat
agcagttttccggggttcgttgctgatgtgcacggattgcaacacgaagatcagggcact
gggcggtgctacaccgtcgattgcatcaaggagtga
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