Pseudomonas sp. UW4: PputUW4_03084
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Entry
PputUW4_03084 CDS
T02357
Symbol
clpV
Name
(GenBank) ClpV1 family type VI secretion ATPase
KO
K11907
type VI secretion system protein VasG
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu02025
Biofilm formation - Pseudomonas aeruginosa
ppuu03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PputUW4_03084 (clpV)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PputUW4_03084 (clpV)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppuu02044
]
PputUW4_03084 (clpV)
Secretion system [BR:
ppuu02044
]
Type VI secretion system
Imp/Vas secretion system core components
PputUW4_03084 (clpV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
AAA_22
AAA_16
nSTAND3
AAA_25
Zeta_toxin
AAA_24
Sigma54_activat
NACHT
Clp_N
IstB_IS21
AAA_7
ATPase_2
NBD_SMAX1
SRP54
AAA_30
Hpr_kinase_C
DUF815
HisK-N-like
Motif
Other DBs
NCBI-ProteinID:
AFY20279
LinkDB
All DBs
Position
complement(3624063..3626705)
Genome browser
AA seq
880 aa
AA seq
DB search
MSHHSTRLLRRLNPYCAQALSAAASLCQSRAHGRISIEHWLLKLLEQGEGDLTLIARRHE
WDMDALWRGLLDHLDRLPRSVQGKPQLCGKLQKLIENAWLRASLEGNDNLRSAHLLGALL
ESPDLLACEAAWSILDLSETQLQQLFALLDQHSEERPHVQQQSALDPLPATPLADGAGHD
ALQAVLDIFTQDVTAKARAGQIDPVFGRDDEIRQVIDILSRRRKNNPILVGEPGVGKTAL
VEGLALRIADGNVPDSLKAVSVRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQQSANPVLL
FIDEAHTLIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQV
VKVDEPDDASACLMLRGLKARYASHHGVHIQDAAVQAAVSLSRRYLTGRQLPDKAVDLLD
TASARVRMSLDCEPQALVRLKARHAALELERRALEQDVQLNGSDLSERLTLIAGQQVEMQ
QQQDDLLCQYRYELDLTRQLLDAREAEPARSDLCAKLQEQLLRAQGSQPMLSLDVDARSV
AEVIADWTGVPLGSLLKDEQASLLTLEWQLGERVIGQESALGALAQRLRAAKTGLTEEQA
PLGVFLLVGTSGVGKTETALALADCLFGGEKSLITLNLSEYQEAHTVSQLKGSPPGYVGY
GQGGVLTEAVRQRPYSVVLLDEVEKAHRDVLNLFYQVFDRGFMRDGEGREIDFRNTVILM
TSNLGSDELQNGLREQPEASDSDLHEWLRPLLREHFQPALLARFQTLIYRPLLADALKHI
VALKLAKVASRLHSHYGLACVIEDGLHDALVAACLLPDTGARNIDSLLNQQILPVLSQQL
LQRQAAKYKTLGVTLGYSDEEGITLQFTDGPSVVAPEGRA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatcattccacgcgcttgcttcgccgcctcaatccttactgcgcccaggcgctc
agcgcggcggcttcgttgtgtcaaagccgtgcccatgggcggatcagcatcgaacactgg
ctgctcaagttgctggagcagggcgagggcgatctgaccctcattgcgcgtcgccatgag
tgggacatggatgcactttggcgcgggttgctcgaccacctcgacaggctgccgcgcagc
gtgcagggcaagccgcagttgtgcggcaagttgcaaaagctcatcgagaacgcctggctg
cgtgcatcgctggagggtaacgacaacctgcgttcggcacacttgcttggcgcattgctg
gagagtccggacctgctggcttgcgaagcggcctggtcaatactggacctcagcgaaacc
cagttgcagcagttgtttgccttgctcgaccaacactccgaggaacgcccgcacgtccaa
cagcaaagcgcgttggacccgctcccggcgacgccgctcgccgacggtgccgggcacgat
gccttgcaagcggtactggacatattcacccaggacgtcaccgccaaggcgagggcaggg
cagatcgacccggtgttcgggcgtgacgatgaaatccgccaggtcatcgacatcctcagc
cggcggcgcaagaacaacccgatcctggtcggcgagcccggcgtcggcaagaccgcgctg
gtcgaaggcctggccctgcgcattgccgatggcaacgtgcccgacagcctcaaggcagtc
agcgtgcgcaccctggaccttggcctgctgcaagcaggcgccggggtaaaaggcgaattc
gaacaacgcctgaaaaacgtcatcgacgccgtgcagcagtcggccaacccggtgctgctg
ttcatcgacgaggctcacaccctgatcggcgccggtaaccaggcgggcggggcggatgcg
gcgaatctgctcaagccggccctcgcgcgaggcgaattgcgcaccatcgccgcgaccacc
tggagcgaatacaaacagtacttcgaacgtgatgctgcgctggagcggcgtttccaggtg
gtcaaggtcgacgagccggacgatgccagcgcctgcctgatgctgcgtggcctcaaggcg
cgttacgccagccatcacggcgtgcacattcaggacgcggcggtgcaggccgcggtcagc
ctgtcgcggcgttatctcaccggccgccagctgccggacaaggccgtcgacctgctcgac
accgccagcgcgcgggtgcgcatgagcctcgactgcgagccccaggcactggtgcggctc
aaggcccggcatgccgcgctggagctggagcggcgcgcactggaacaggatgtgcaactc
aatggcagcgacttgagcgaacgattgacgctgatcgccgggcagcaggtcgagatgcaa
caacagcaggacgacttgctgtgccagtaccgctatgaacttgacctgacccgacaattg
ctcgatgcgcgtgaggccgaaccggcccgcagcgacctctgcgcgaaactgcaggagcaa
ttgctgcgggctcagggcagccagccaatgctgtccctggacgtcgatgcacgcagtgtt
gcggaagtcatcgccgactggaccggcgtgcccctgggcagtttgctcaaggacgaacaa
gccagcctgctgactctggaatggcaactcggcgagcgggtgattggccaggaatctgcc
ctcggtgccttggcccagcgcctgcgcgcagccaagaccggcttgaccgaagagcaggcg
ccgttgggggtattcctgttggtgggcaccagcggcgtcggcaagaccgaaaccgccctg
gcgctggcggactgcctgttcggtggcgaaaaatccctgatcaccctcaacctgtccgag
taccaggaggcccacaccgtcagccagctcaagggctcgccaccgggttacgtaggttac
ggccagggcggcgtgctcaccgaagcggtgcgccagcggccctatagcgtggtgctgctg
gatgaggtggaaaaggcccaccgcgacgtgctcaacctgttctaccaggtgttcgaccgc
ggcttcatgcgtgatggcgaaggacgcgaaatcgacttccgcaacactgtcatcctgatg
acctccaacctcggcagcgatgagctgcaaaacggtctgcgcgaacagcccgaagccagc
gacagcgacttgcacgaatggctgcgaccgctgctgcgcgagcacttccagccggcgttg
ctcgcccgcttccagaccctgatctaccgcccgctgctggccgacgcgctcaagcatatc
gtcgccctgaaacttgccaaggtcgccagtcgcctgcacagccattacggcctggcctgc
gtgattgaggatggcctgcacgatgcattggtcgccgcctgcctgctgcccgacaccggt
gcgcgcaacatcgacagcctgctcaaccagcagattctgccggtcctcagtcaacagttg
ctgcagcgtcaggccgccaaatacaaaacccttggcgtaaccctgggctacagcgatgag
gagggcatcacgctgcaattcaccgacggaccttcagtcgttgcacctgagggccgagca
tga
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