Pseudomonas sp. UW4: PputUW4_03088
Help
Entry
PputUW4_03088 CDS
T02357
Name
(GenBank) type VI secretion protein
KO
K11893
type VI secretion system protein ImpJ
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PputUW4_03088
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppuu02044
]
PputUW4_03088
Secretion system [BR:
ppuu02044
]
Type VI secretion system
Imp/Vas secretion system core components
PputUW4_03088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AFY20283
LinkDB
All DBs
Position
complement(3629777..3631132)
Genome browser
AA seq
451 aa
AA seq
DB search
MKIDRPLWAAGALLSPQQFQQQARWEAWANERLARLSLVHPWGVQDVAFDLHALRLGKLK
ATRLSLRMPDGTLIDTDHVDRLPLGLELSRLLSDDTQAATLLLALPLEQANGNNCLFDAD
KADRPTRYRQDWRQVQDIYADEVQSVGVLEYVLSLRFDHDENGDYLTCPIARLVRDGQGA
WSLDPDYVPPLLSFAAHPGLLTQLDNLLTQLSSKRQRLMGMRRESNQRMADFAVADVSLF
WLLNALNTYQPVLADLKAWPARHPEQVYLELTKLAGSLLTFSLEHDVEQIPPYRHEHLES
VFPPLLRMISTLLEASLPSRVIALTLEQSAANRWQVRLDDARLREPDSADFYLSVRCRLP
AVQLQSQFPQLCKIGTPDEVDHLVNAALDGVPLQSLSHVPAAIPLRLENQYFALDLNHAK
GQAIRDQGICALYVPSTLAEVKLELFAVLRA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgaccgccccttgtgggccgcgggggcattgctgtccccgcagcaattccag
cagcaggcgcgctgggaagcctgggccaacgagcgtctggctcgtctgtccctggtgcac
ccctggggcgtccaggacgtcgcgtttgacctgcacgcactgcgcctgggcaagctcaag
gccactcgcctgagcctgcgcatgcccgacggcaccttgatcgacaccgaccatgtggat
cgactgcccctggggctggagctgtcgcgcctgctgtccgacgatacccaggcggcgacc
ttgctcctggccttgccactggaacaggccaatggcaacaactgcctgttcgacgccgac
aaggccgatcgacccacccgttatcgccaggactggcgtcaggtgcaggacatttacgcc
gatgaagtgcaatcggtcggcgtactggaatacgtgctgagcctgcgcttcgatcacgac
gagaacggcgattacctgacctgcccgatcgcgcgcctggtacgtgacgggcagggcgcc
tggagccttgatcctgactatgtaccaccgctgctcagtttcgcggcgcacccgggtctg
ttgacgcaactggacaacctgttgacccagttgtcctccaagcgtcagcggctgatgggc
atgcgccgtgagagtaaccagcgaatggccgacttcgccgtggccgacgtgtcgttgttc
tggttgctcaatgccttgaacacctaccagccggtattggccgatctcaaggcctggccg
gcgcgacatcccgagcaggtctatctggagctgacaaaactggccggcagtctgctgacc
ttttcgctcgaacacgatgtcgagcagattccgccttatcgccacgaacacctggaaagc
gtgttcccgccgctgttgcgcatgatctccacgttgctggaggccagcctgccttctcgc
gtcatcgccctgacactcgagcagagcgcagccaaccgttggcaggtccgacttgacgac
gcccgtttgcgcgagcccgacagcgccgacttctatctgtcggtgcgttgccgcttgcca
gccgtgcaattgcagagtcagttcccgcaactgtgcaagatcggcacaccggacgaagtc
gatcacctggtcaacgccgccctcgatggcgtgccgttgcagtccctcagtcatgtcccg
gcggccatccccttgcgtctggaaaaccagtacttcgccctggatctcaaccatgccaag
ggacaagccattcgggaccagggtatctgtgccttgtacgtcccgagcaccctggccgaa
gtgaaacttgaactgttcgcggtactacgcgcatga
DBGET
integrated database retrieval system
