Pseudomonas sp. UW4: PputUW4_03089
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Entry
PputUW4_03089 CDS
T02357
Symbol
tssC
Name
(GenBank) EvpB family type VI secretion protein
KO
K11900
type VI secretion system protein ImpC
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PputUW4_03089 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppuu02044
]
PputUW4_03089 (tssC)
Secretion system [BR:
ppuu02044
]
Type VI secretion system
Imp/Vas secretion system core components
PputUW4_03089 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
AFY20284
LinkDB
All DBs
Position
complement(3631174..3632712)
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AA seq
512 aa
AA seq
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MSIEHSHAQSRGTTVLPEESQGVYGALFGKINLNPVKVLGEIEVFQSSEALSDVSADERV
TAAVSVFLNLIKQSSRKVRRLDRTLLDEHIASLDAQISRQLDAVMHHPDFQRVESTWRGV
KSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEIAQSGLYVHTYTQEYDTPGGEPIAAA
ISNFEFDRSPQDIALLRNISKVSAAAHMPFIGSVGPAFFGKHSMEEVAAIKDIGNYFDRA
EYIKWKAFRDSDDARYIGLLMPRVLGRLPYGPDTVPVRSFNYIESVKGPDHDKYLWTNAS
FAFAANMVKSFIANGWCVQIRGPQSGGAVTDLPIHLYDLGTGNQVKIPSEVMIAETREFE
FANLGFIPLSYYKNRDYACFFSANSTQKPALYDTPEATANSRINARLPYIFLLSRIAHYL
KLIQRENIGTTKDRRLLELELNKWVSGLVTEMNDPGDSLQASHPLRAGRVTVEDIEDNPG
FFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcgaacattctcacgcgcaatcgcgcggcactacagtgttgcctgaagaaagc
caaggcgtgtatggcgcgttgtttggcaagatcaatctcaacccggtaaaagtgctgggc
gaaattgaagtgtttcaaagttccgaggcgctgtcggacgtttctgccgatgagcgagtg
actgccgctgtcagtgttttcttgaatttgatcaaacagtcttcgcgcaaagtccggcgt
ctggacaggacactgctggatgaacatattgcgtcgctggatgcacaaatcagccgccaa
ctggacgccgtgatgcatcacccggatttccagcgggtggagtccacctggcgcggtgtg
aaatcgctgatcgatcagaccgacttccgccagaacgtgcgcatcgaattgcttgatatc
agcaaggatcacctggtccaggatttcgaggatgcaccggagatcgcacaaagtggcctg
tatgtgcatacctacacccaggagtacgacaccccgggtggtgagccgatcgccgctgcc
atttccaacttcgagttcgaccgcagcccgcaggacattgccttgctgcgcaatatttcc
aaagtctcggcagccgcgcacatgcccttcattggctccgtcggcccggccttttttggc
aagcactcgatggaagaagtcgccgccatcaaggacatcggcaactactttgatcgtgcc
gaatacatcaagtggaaagcgttccgcgacagcgacgatgcccgctatatcggcttgctc
atgccccgcgtgctgggccgtctgccgtatggcccggacaccgttccggtgcgcagcttc
aactacatcgaaagcgtcaagggaccggaccacgacaaatacctgtggaccaacgcctcg
tttgccttcgctgccaacatggtcaagagctttatcgccaacggctggtgcgtgcagatc
cgcggtccgcagtctggcggcgcggtcaccgacttgccgatccacttgtatgatctgggc
actggcaatcaggtgaagatcccttcggaagtgatgattgcggagacgcgcgagttcgag
ttcgccaacctcggtttcatcccgctctcgtactacaagaaccgtgactatgcgtgcttc
ttctcggccaactccacgcagaaaccggcgctatacgatacccctgaggccaccgccaat
agccggatcaatgcgcgcctgccctacatcttcctgctgtcacgcattgcccattacctg
aagctgatccagcgcgaaaacatcggcaccaccaaggatcgccgattgctggagctggag
ctgaacaagtgggtcagcgggctggtcaccgagatgaacgatccgggcgactcgctgcag
gcttcgcacccgttgcgggctggccgggtcaccgtcgaagacatcgaggacaacccgggt
ttcttccgcgtcaagttgtacgccgtgccgcatttccaggtggaaggcatggacgtcaac
ctgtcgctggtttcgcagatgcccaaggcaaaagcctga
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