Pseudomonas sp. UW4: PputUW4_03090
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Entry
PputUW4_03090 CDS
T02357
Symbol
tssB
Name
(GenBank) type VI secretion protein
KO
K11901
type VI secretion system protein ImpB
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PputUW4_03090 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppuu02044
]
PputUW4_03090 (tssB)
Secretion system [BR:
ppuu02044
]
Type VI secretion system
Imp/Vas secretion system core components
PputUW4_03090 (tssB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
AFY20285
LinkDB
All DBs
Position
complement(3632746..3633249)
Genome browser
AA seq
167 aa
AA seq
DB search
MASGSFQNEVPKARVNIKLDLHTGDAQKKVELPLKLMVMGDYSNGKEQRPLSERSKVAID
KNNFDSVLAEFSPEVKLAVANTLAEDAGEAAVNLGFRSMKDFEPEQVARQIPQLRALLAM
RNLLRDLKSNLLDNATFRQELERILMDEALSDELRGELAALTPEHIR
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggtagttttcaaaacgaagtgcccaaggcacgggtcaacatcaagctcgat
ttgcatacgggcgatgcacagaaaaaagtcgaattgccgctcaagttgatggtgatgggc
gactacagtaacggcaaggaacagcggccgttgtccgagagaagcaaagtcgccatcgac
aagaataatttcgatagcgtgctggccgagttttctcccgaggtcaagctggcggtggcc
aataccctggcggaggatgccggcgaagcggcggtcaacctgggtttccggagcatgaag
gacttcgagccggaacaagtggctcggcaaattccgcaactgcgcgcactgctggcaatg
cgtaacctgctgcgcgacctcaagtccaacctgttggacaatgccacgttccgtcaggaa
ctggagcgtattctcatggacgaggcactgagtgacgaactgcgaggtgagttggcggca
ctgactccggaacacattcgttaa
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integrated database retrieval system
