Pseudomonas sp. UW4: PputUW4_03201
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Entry
PputUW4_03201 CDS
T02357
Name
(GenBank) GntR family transcriptional regulator
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
ppuu
Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppuu03000
]
PputUW4_03201
Transcription factors [BR:
ppuu03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PputUW4_03201
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
MarR_2
HTH_24
HTH_IclR
HTH_Crp_2
TrmB
Fe_dep_repress
HTH_CodY
HTH_11
HVO_A0261_N
DUF6880
GMT-wHTH
HTH_36
HTH_5
HTH_27
HTH_41
Ribosomal_S25
MarR
FliX
HTH_29
HTH_23
HTH_28
HTH_20
TFIIE_alpha
DUF8136
Motif
Other DBs
NCBI-ProteinID:
AFY20396
LinkDB
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Position
3747746..3748498
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AA seq
250 aa
AA seq
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MKRLPLDDSFKVNRNPVTLREIVLDKLRSAIMNFQLLPGDRLVERDLCDRLGVSRTSVRE
ALRHLESEGLVEFADAKGPRVAIITLADAVDIYELRCVLEGLIVQLFTLRAKAKDIKALE
KALEENRKALKDGELQQVIDSVQGFYDVLLEGSGNHVAATQLRQLQARISYLRATSVSQE
NRRGASNQEMERMVEAIKGGDPLAAHQACVDHVRAAAAVALDYLKRKQEETGDIPAITLP
IALKEPRIGR
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcctgccactcgacgacagcttcaaggtcaatcgcaaccccgtcaccctgcgc
gaaatcgtgctggataaactgcgaagcgccatcatgaacttccagctcctgccgggagac
cgtctggtcgaacgcgatctgtgcgatcgcctgggcgtcagccgtacttccgtgcgcgaa
gccttgcgtcacctggaatccgaaggcctggtggaattcgccgatgccaagggcccgcgt
gtcgcgatcattaccctggccgacgccgtggacatctacgagctgcgctgcgtgctcgaa
gggctgatcgtgcaactgttcaccctgcgcgccaaggccaaggacatcaaggccctggaa
aaagccctcgaagaaaaccgcaaggcgctcaaggacggcgaactgcaacaggtcatcgat
tcggtgcagggtttctacgacgtgctgctcgaaggctcgggcaaccatgtcgcggccacc
cagctgcgccagttgcaggcacgcatcagctacctgcgcgcgacctcggtgtcccaggag
aaccgtcgcggcgccagcaaccaggaaatggaacgcatggtcgaggcgatcaagggcggc
gatccgctggccgctcaccaggcttgcgtcgaccacgtgcgcgcggctgctgccgtggcc
ctggactacctcaagcgcaagcaggaagaaaccggcgacatcccggcgatcaccctgccc
atcgcgctgaaagaaccgcgcataggtcgctga
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integrated database retrieval system
