Pseudomonas sp. UW4: PputUW4_03379
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Entry
PputUW4_03379 CDS
T02357
Name
(GenBank) LysR family transcriptional regulator
KO
K13794
LysR family transcriptional regulator, regulatory protein for tcuABC
Organism
ppuu
Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppuu03000
]
PputUW4_03379
Transcription factors [BR:
ppuu03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PputUW4_03379
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PRR11_2nd
Motif
Other DBs
NCBI-ProteinID:
AFY20572
LinkDB
All DBs
Position
3938771..3939706
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AA seq
311 aa
AA seq
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MELRQLRYFVKIIELGSLGRAALELDVGVSALSQQISKLESELCTRLLNRTSTGVTPTSA
GFAFLHHAQLTLRQAENAIMAAHRGRMSGYVSVGLPPTTATVLALPLINAMRARYPDIQL
HLVEMLSGHLAAQLNARQIDLAILFQLEGGKRWSVTPLLDEKLFVIASPSLPQAPSGDSV
QLADLGGLPLVMPSAQHGLRSALMSAFERVGLTPNVIMEVDGLAVLMNAVRAGHAATIQP
GAAAAVNDGSGLSLVRIADPHVGRRNLLATLADDELSPAALATRLVIVDVVRQLVVDNQW
PGATWIEEVDA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttggaattgagacaactgcgctatttcgtaaaaatcattgagcttggcagcctggggcgt
gcggcacttgaactggacgttggtgtgtcagccctcagtcaacaaatctccaagctggaa
agcgaactgtgcacccgcctcctgaatcgaacctccaccggtgtgacgcccactagcgcc
ggatttgcgtttttacaccatgcccaactgacgctacgccaggcggaaaatgccatcatg
gccgcccatcgcgggcgaatgagcggttatgtcagcgtcggcttaccaccgactaccgcg
acggtactcgcgttgccgttgatcaacgcaatgcgtgcgcgttatccggacatacaactg
catttggtggaaatgctttccggccacttggcggcgcagctcaacgcacggcaaattgat
ctggccatcctgttccagctcgaagggggtaaacgctggagcgtgactccgctgctggat
gaaaagctgtttgtcatcgcctcgcccagcctgcctcaagcgccttctggtgacagcgta
cagttagccgacctcggcggcctaccgctggtgatgcccagtgcacaacatggactgcgc
tcggcattgatgagcgcgttcgagcgggtggggctaacacccaatgtcattatggaagtc
gacggtctggctgtgttgatgaacgccgtccgggccggtcatgcggcaacgatacaaccg
ggggcggccgctgcggtcaatgacggatccggactttcactggtcaggattgccgatccc
catgtgggccggcgtaatcttctggcaacgctggctgacgacgaactctctcctgcggcg
ttggcaacgcggttggtcatcgtcgacgtggtacgacaattagtcgtcgacaaccagtgg
cctggagctacgtggattgaagaggtagacgcgtaa
DBGET
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