Pseudomonas sp. UW4: PputUW4_03482
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Entry
PputUW4_03482 CDS
T02357
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ppuu
Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppuu01002
]
PputUW4_03482
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppuu01011
]
PputUW4_03482
Peptidases and inhibitors [BR:
ppuu01002
]
Cysteine peptidases
Family C82
PputUW4_03482
Peptidoglycan biosynthesis and degradation proteins [BR:
ppuu01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PputUW4_03482
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AFY20675
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All DBs
Position
complement(4046981..4048735)
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AA seq
584 aa
AA seq
DB search
MVQLTRSFVISRMFFMGFLISGAAFAQTSPIEPVSAASSTSDAAAPDDAVGQAIQATLEP
LRSAFPPLLTSRRNQRVDVSRVVLDFYMHRNYRAAWTDDRDVVQLLKSLEDTRVDGLTPA
DFRITELARAHESLMAAMPSTAQRAMFDMAATRTFITALLQLRRGKVDPSRLDIHWNFDP
AGGNAREDMNNLFSALDAHDVARAFADAPPQEEIYRNLREGLARLRQVRDAGGWPKVTEG
QSLKPGMDGVAVGQLRARLVAGGYLDPHLAKKAGYDDKVIAAVKKYQTEQYLGADGVAGA
ATLAALNVPVEARIDQVRVNMERARWLLYKLQGTFVIVDIAGYKVAMYRDGLPIWRSRVQ
VGKPVRSTPVFQAEITYITFNPTWTVPPTILKQDVIPKIQNDPGYLAANRIRVLDREGNV
LDPSDVDWSNPRGIRLRQDAGPDSSLGQVVIRFPNDYAIYLHDTPHRELFAKTVRATSSG
CIRVENPLQLVELLFNDPVRWNSAGIQKQLANGRTENIQLPVKVPVLLAYWTVDLSNDGR
VTFKPDIYDYDARVLQGLSQPTKLPPLDLRQAEIPLVVTGQGQQ
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaattaacaaggtcattcgtcataagccgcatgttttttatgggctttctgatc
agcggtgcggcctttgcgcaaacttcgccgattgagccggtatctgcagcgagcagcaca
agcgatgccgcggcgcctgacgatgcggtcggccaggcgattcaggcaacgctggaaccg
ctgcgctcggcctttccgccgttgctcacttcaaggcgcaatcagcgtgtggacgtcagc
cgggtggtgctggatttctatatgcatcgcaactatcgcgccgcgtggacggatgatcgt
gatgtggtccagttactcaagagcctcgaagacacccgggtcgacggcctgaccccggcg
gattttcgtatcaccgaactggcccgggcccatgaatcgctgatggccgccatgccttcg
acggcacagcgggcgatgttcgacatggcggctacccgcaccttcatcaccgcgttgctg
caactgcgccggggcaaggtcgatccgtcgcggctggacattcactggaatttcgatcct
gccggcggtaatgcccgcgaggacatgaacaacctgttcagcgccctcgatgcccatgac
gtggcacgtgcattcgccgatgcgcctcctcaggaagagatttaccgcaatttgcgcgag
ggcctggcccggttgcgccaggtgcgtgatgcgggcggctggccgaaagtcaccgaaggt
caatcgctcaagcccggcatggacggggtggcggtcggacaattgcgtgcgcgcctggtg
gcgggcgggtacctggacccgcacctggcgaaaaaagccggttacgacgacaaggtcatc
gccgcggtgaagaagtatcagaccgagcaatacctgggggccgacggcgtggcgggggcg
gcgacgctggcggcgctgaacgtgccggtcgaggcgaggatcgatcaggtgcgggtcaac
atggaacgcgcccgctggctgttgtacaaacttcagggcacgttcgtgattgtcgatatc
gccggctacaaggtggcgatgtatcgcgacggtctgccgatctggcgttcgcgggtgcag
gtcggcaagccggtgcgcagtacgccggtgttccaggccgaaatcacctacatcacattc
aacccgacctggaccgtgccgccgaccatcctcaagcaggacgtgattccaaaaatccag
aacgatcctggctatctggcggccaaccggattcgcgtgcttgatcgcgaaggcaatgtg
ctcgatccgtcggacgttgactggagcaacccgcgaggcatccgcctgcgtcaggatgcc
ggccccgacagttcgttggggcaggtggtgatccgcttccccaacgactatgcgatttac
ctgcatgacacgccgcaccgcgagctgtttgccaagacggtccgggccaccagctcgggc
tgcatccgcgtggaaaacccgctgcaacttgtcgagttgttgttcaacgacccggtgcgc
tggaacagtgccgggattcaaaagcagttggccaatggcaggaccgagaatatccagctg
ccggtgaaggtgccggtgctgctggcctattggaccgtggacctgagcaatgacgggcga
gtgacgttcaagccggacatttatgattacgatgcccgggtgttgcagggcttgagtcag
ccaacgaaattgcctcccctggatttgcgtcaggcagagatcccactggtggtgacgggg
cagggccaacagtaa
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