Pseudomonas sp. UW4: PputUW4_03523
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Entry
PputUW4_03523 CDS
T02357
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00071
Fatty acid degradation
ppuu00280
Valine, leucine and isoleucine degradation
ppuu00310
Lysine degradation
ppuu00362
Benzoate degradation
ppuu00380
Tryptophan metabolism
ppuu00410
beta-Alanine metabolism
ppuu00640
Propanoate metabolism
ppuu00650
Butanoate metabolism
ppuu00907
Pinene, camphor and geraniol degradation
ppuu00930
Caprolactam degradation
ppuu01100
Metabolic pathways
ppuu01110
Biosynthesis of secondary metabolites
ppuu01120
Microbial metabolism in diverse environments
ppuu01200
Carbon metabolism
ppuu01212
Fatty acid metabolism
Module
ppuu_M00087
beta-Oxidation
ppuu_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PputUW4_03523 (fadB)
00650 Butanoate metabolism
PputUW4_03523 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PputUW4_03523 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PputUW4_03523 (fadB)
00310 Lysine degradation
PputUW4_03523 (fadB)
00380 Tryptophan metabolism
PputUW4_03523 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PputUW4_03523 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PputUW4_03523 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PputUW4_03523 (fadB)
00930 Caprolactam degradation
PputUW4_03523 (fadB)
Enzymes [BR:
ppuu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PputUW4_03523 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PputUW4_03523 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PputUW4_03523 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PputUW4_03523 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AFY20716
LinkDB
All DBs
Position
complement(4091525..4093672)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVVAINGIALGGGLE
MCLAADYRVMSTKAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRPEDAL
KVGAVDAVVAPEKLQEAALELIKRAICGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDQVK
EDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFYAYETDKKGKQ
KKVADPSVLEVLKPIVFEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacaccatcaaggcagatgcttcgatcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaatttgtcgacaacttcaagctg
ccggatgcagagcttgttgctggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaacgttccgaccgttgtcgcgatcaatggcatcgcgctgggtggcggtctggaa
atgtgcctggcggcggactaccgcgtcatgtccaccaaggccaagatcggcctgccggaa
gtcaagctgggcatctacccgggcttcggcggtaccgttcgtctgccgcgtctgatcggt
gccgacaacgccatcgagtggattgccgccggcaaggaaaaccgtcctgaagacgcgctc
aaagttggcgctgtcgacgcagtggttgctccagagaaactgcaagaggccgcgctggaa
ctgatcaagcgcgccatctgcggcgagttcgactacaaggccaagcgccagccgaagctg
gaaaagctgaagctgaacgctatcgagcaaatgatggctttcgaaaccgccaagggtttc
gtggccggtcaagctggcccgaactacccggcgccggttgaggcgatcaagaccatccag
aaagccgcgaacttcggtcgcgacaaggccctggaaattgaagccgcaggtttcgtcaag
ctggccaagacctctgctgcgcagagcctgatcggtctgttcctgaacgaccaggagctg
aagaaaaaggccaaggcctacgacgaaatcgccaaggacgtgaagcaggccgccgtactg
ggcgccggcatcatgggtggcggtatcgcctatcagtcggcttccaaaggcacgccgata
ctgatgaaggacatcaacgagcacggcatcgagcagggtctggccgaagccgccaaactg
ctggttggccgcgttgataaaggccgcatgaccgccgcgaaaatggctgaagtgctcaac
ggcattcgtccgaccttgtcctacggtgatttcggtcacgtggacctggtggtggaagca
gtcgtcgagaacccgaaggtcaagcaggccgtactggctgaagttgaagaccaggtcaaa
gaggacaccatcctcgcgtccaacacctcgaccatttccatcaccttgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagtgagctggccgttgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgactgcccgggcttcctggtc
aaccgcgtactgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtggac
ttcgtccgtatcgacaagatcatggaaaagttcggctggcctatgggcccggcctacctg
atggacgtggtcggcatcgacaccggccaccacggccgtgacgtgatggctgaaggcttc
ccggaccgcatgaaggacgaccgtcgctcggctgtcgacgtgctctacgaagccaagcgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagaagggcaagcag
aagaaagtcgccgatccttcggtgctggaagtgctcaagccaatcgtctttgaacagcgc
gaagtcactgacgaagacatcatcaactggatgatgatcccgctgtgcctggaaaccgtg
cgttgcctggaagacggcatcgtcgaaaccgctgccgaagccgacatgggtctggtctac
ggcattggtttccctccattccgtggcggtgcgctgcgttacatcgattcgatcggtgtg
gcagagttcgttgccctggctgaccagtacgctgatttgggcgcgctgtaccacccgacc
gcgaagctgcgcgaaatggccaagaacggccagagcttcttcggttaa
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