Pseudomonas sp. UW4: PputUW4_03597
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Entry
PputUW4_03597 CDS
T02357
Symbol
smc
Name
(GenBank) chromosome partition protein
KO
K03529
chromosome segregation protein
Organism
ppuu
Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppuu03036
]
PputUW4_03597 (smc)
Chromosome and associated proteins [BR:
ppuu03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
PputUW4_03597 (smc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
SMC_hinge
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AFY20789
LinkDB
All DBs
Position
complement(4176541..4180029)
Genome browser
AA seq
1162 aa
AA seq
DB search
MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES
MTDVIFNGSTSRKPVSQASIELVFDNSDGTLLGEYAAYAEISIRRKVTRDSQTTYYLNGT
KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIESKPEDLRNFIEEAAGISKYKERRRET
ENRIRRTHENLERLTDLREELTRQLERLHRQAEAAKKYQEYKGEERQLKAQLSALRWQAL
NDQVGQREAIIGNQEVSFEALVAEQRNADASIERLRDGHHDLSERFNLVQGRFYSVGGDI
ARVEQSIQHGQQRLRQLQDDLKEAERARLETESHLGHDRTLLLTLGEELDMLTPEQEVTS
AAAEEAAAALEESETTMHGWQEQWDTFNLTAAEPRRQAEVQQSRIQQLETSLERLADRQK
RLGEERALLSADPEDAAIMELSEQLAESEATLEDLQTSEEAQVEKLEQLRQQLQQTLTAQ
QQAQGDLQRLNGRLASLEALQQAALDPGTGTAQWLREQNLANRPRLAEGLKVEAGWELAV
ETVLGADLQAVLVDDFNDFDLSGFAQGDLRLLSPAGDGVRVPGSLLDKVEAQIDLSPWLG
QVKPVDSLEQALALRGQLAAGQSLISRDGYWVGRHFLRVRRASEAESGVLARGQEIQQLG
LEREEREAAVETLETQLQNLRAQQRQQENGREHLRRLLQDEARQQGELKAQLSAGKAKAE
QLTLRRTRLDEELTELDEQRALEHENIGEARLQLQEALDSMALDTEQRELLLAQRDSLRE
RLDRVRQEARQHKDHAHQLAVRLGSLKAQHDSTRQALERLEMQSERLTEKREQLSLNLEE
GEAPLEELRLKLEELLDKRMTVDEELKTAQIALEDADRELRDAEKRRSQAEQQSQLIRSQ
LETQRMEWQALTVRRKTLQDQLLEDGYDLHGVLATLTAEASEKEAEEELERIAARIQRLG
AINLAAIDEYQQQSERKRYLDAQDADLVEALETLENVIRKIDKETRNRFKDTFDQINGGL
QALFPKVFGGGRAYLELTGEDLLDTGVTIMAQPPGKKNSTIHLLSGGEKALTALALVFAI
FKLNPAPFCMLDEVDAPLDDANVGRYAKLVKEMSQSVQFIYITHNKIAMEMADQLMGVTM
HEPGCSRLVAVDVEEAMAMVDA
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
gtgcggctcaagtgcatcaagctggcggggttcaagtccttcgtcgacccgaccacggtg
aacttcccgagcaacatggcggcggtggtcgggcccaatggctgcggcaaatcgaacatc
atcgacgccgttcgctgggtaatgggtgaaagttcggcgaagaacctccgtggcgagtcg
atgaccgacgtcatcttcaacggctccaccagccgcaagccggtgagccaggcgagcatc
gaactggtgttcgataactccgacggcaccctgcttggcgaatacgccgcctacgcggaa
atttccattcgccgcaaagtgacgcgcgacagccagaccacctattacctcaacggcacc
aagtgccggcgtcgtgacatcaccgacatcttcctcggcaccggccttggcccgcgcagc
tactcgatcattgagcaggggatgatctccaaactgatcgagtccaagcccgaagacctg
cgcaacttcatcgaagaagcggcgggcatctccaagtacaaggagcgccggcgcgaaacc
gaaaaccgcatccgtcgtacccacgagaacctggagcgcctgaccgacctgcgcgaagag
ttgacgcgtcagctcgagcgcttgcatcgccaggccgaggccgccaagaagtaccaggaa
tacaagggcgaggagcgccaactcaaggcgcaactgtcggccctgcgctggcaggcgttg
aacgatcaggtcggccagcgtgaagcgatcatcggcaaccaggaggtttccttcgaagcc
ctggtggccgaacagcgcaatgccgacgcgagcatcgagcgcctgcgtgacgggcaccac
gacctgtcggaacgcttcaatctggtgcaagggcgtttctactcggtcggcggtgacatt
gcccgggtcgagcagagcatccagcacggccagcaacgcttgcggcaattgcaggacgac
ctcaaggaagccgagcgcgcacgcctggaaaccgaatcccacctcggccatgaccgcacg
ctgctgctgaccctgggcgaagagctggatatgctgaccccggaacaggaagtcaccagc
gccgccgccgaagaggccgccgccgcgctggaagaatccgaaaccaccatgcatggctgg
caggagcagtgggatacgttcaacctcaccgccgccgaaccgcgccgtcaggccgaagtc
cagcaatcgcggatccagcagctggaaaccagcctggagcgcctggccgatcgtcagaag
cgcctgggcgaagagcgcgccttgctctcggcggacccggaagacgcggcgatcatggag
cttagcgagcaactcgccgagtccgaggcgaccctcgaagatttgcagaccagtgaagag
gctcaggtcgaaaagctcgagcaactgcgccagcaattacagcaaacgctgacggcgcaa
caacaggcccagggcgatttgcagcggctcaacggtcgattggcttcgctcgaagccttg
cagcaagccgcgctcgatccgggcaccggcaccgcccaatggctgcgtgaacagaacctg
gcgaatcgcccgcgccttgccgaaggcctgaaggtcgaggccggttgggagctggcggtg
gaaaccgtgcttggtgccgacctgcaggcggtgctggtggacgatttcaacgatttcgat
ctgtcgggctttgcccagggcgacttgcgcttgctcagcccggccggcgatggcgtacgg
gtgccgggcagcctgctggacaaggtcgaggcgcagatcgatctgtcgccatggctgggg
caggtcaagccggtcgacagccttgaacaggccttggccttgcgcgggcaattggctgcc
gggcagagcctgatcagccgtgacggttactgggtcggtcggcattttctgcgcgtacgt
cgggccagtgaggcggaaagcggcgtgctcgcccgtggccaggaaatccagcaactgggc
ctcgagcgtgaagagcgcgaagccgcggtcgaaaccctggaaacccaactgcagaatctc
agggcgcagcagcgtcagcaggaaaacggccgcgagcacttgcgccgtttgctgcaagac
gaagcccgtcagcaaggtgaattgaaagcccagttgtcggccggaaaagccaaggccgag
caattgaccctgcgccgcactcgcctcgacgaagagctcaccgagctggatgaacagcgc
gcgctggagcacgaaaacatcggtgaagcgcgcctgcaactgcaggaagccctcgacagc
atggcgctggacaccgagcagcgcgagttgctgctggcccagcgcgacagtttgcgcgag
cgcctggatcgggtgcggcaggaggcgcggcagcacaaggatcatgcccatcagttggcg
gtgcgtctgggttcgctcaaggcgcagcacgattcgactcgccaggcgctggagcgtctg
gagatgcagtccgagcgcctgaccgaaaagcgcgaacaactgagcctcaatctggaggag
ggcgaagcgccactggaagagctgcgcctgaaactcgaggagttgctcgacaagcgcatg
accgtcgacgaggaactcaagaccgcgcagatcgccctcgaagacgccgaccgcgaactg
cgcgacgccgaaaagcgccgcagccaggccgaacagcaatcccagttgattcgcagccag
ctcgaaacccagcgcatggaatggcaagccctgaccgtacgccgcaagaccttgcaggac
cagttgctggaagacggctacgatctccacggcgtactcgcgacattgaccgccgaggcc
agcgagaaggaagccgaggaagaactcgagcgcatcgccgcgcgaattcagcgtctgggc
gcgatcaacctggcggccatcgatgagtaccagcaacaatcggagcgtaaacgttatctg
gatgcccaggacgccgatctggtggaagcgcttgaaacccttgagaacgtgattcgcaag
atcgacaaggaaacccgcaaccgcttcaaggatacctttgatcagatcaatggcggttta
caggcgcttttcccaaaagttttcggtggaggccgcgcgtatttggaactgacgggcgaa
gatctactcgatacaggggtgacaatcatggcgcagccgcctggaaagaagaacagcacc
atccatttgctctccggtggcgaaaaggccctgaccgcattggccctggtttttgcgatc
ttcaagttgaatccggcgccgttctgcatgctcgatgaagttgacgcgccactggatgac
gctaacgttggacgctacgcaaaattggttaaagagatgtcgcagtcagtgcagttcatc
tatatcacccacaacaagatcgccatggaaatggccgatcaactgatgggggtgacgatg
cacgaacccggttgttcacgtctggtggcggtggatgtcgaggaggcgatggcgatggtg
gatgcctga
DBGET
integrated database retrieval system
