Pseudomonas sp. UW4: PputUW4_03621
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Entry
PputUW4_03621 CDS
T02357
Symbol
sipD
Name
(GenBank) type III effector protein cell invasion protein
KO
K13287
invasin D
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
PputUW4_03621 (sipD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppuu02000
]
PputUW4_03621 (sipD)
Transporters [BR:
ppuu02000
]
Other transporters
Pores ion channels [TC:
1
]
PputUW4_03621 (sipD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T3SS_TC
Scm3
DUF2610
Motif
Other DBs
NCBI-ProteinID:
AFY20813
LinkDB
All DBs
Position
complement(4207572..4208666)
Genome browser
AA seq
364 aa
AA seq
DB search
MRIAEPSHPGSGLPADFNANVDAPLLPEMPAEVHAGFSLAQLLERSGKVLNRHLENMLKC
QAGVPRDLQGSPAEILAQYFSSTEFAEQTHAKRIRSLMWTHQMRQTGMVFNLCLDTLPME
QRQPLYDEQDRILDEHRRMSVPDEIADEFDARVNSSVEFFDKLIDLIDLIKKGYLGGYEY
IMDAYSDFFVDFNELITARLKDWVVGEDQGNGVWLYNGPLRTALNELIKKYSHPNPASVL
FPKPGKEGVSREEAKKWLDTLGLPDACLKLNSDGSYCVVIDTGPLWTMRDSLPPGGGNDS
VYFDNARFQAWQTGFNAQEERLKNTLQSFTQKYSNANSYHDNFSKTLSSHLNQFFDMLKA
MLNF
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgcagagccctcacatccaggaagcggtttgcctgctgacttcaatgccaac
gttgatgcgccgctgcttcccgaaatgcctgccgaagtccacgctggattttcccttgcg
cagttgctcgagcgttcggggaaggtgctcaatcgtcacctggaaaacatgcttaagtgt
caagcgggcgttccaagagaccttcaaggctcgcctgcagaaattcttgcgcagtatttt
tcgtctaccgagtttgccgagcagactcacgctaaacgtattcgatcgctgatgtggaca
caccagatgcgtcagactggaatggtgttcaatctttgcctcgatacgctgccaatggag
caacgtcagccactctacgatgagcaagatcgtattctcgatgagcacagacgaatgtcg
gtgccggatgagatcgctgacgagttcgacgcgcgagtgaactcttcagtcgaatttttc
gacaagctgatcgacctcattgacctgatcaaaaaaggttatctgggcggttatgaatac
attatggatgcctattcggacttcttcgtcgatttcaatgagctaattaccgcgaggttg
aaagactgggtcgtgggtgaggaccaaggtaacggggtctggttgtacaacggtccgctg
cgaaccgcactcaatgagctgatcaaaaaatacagccatccaaatcctgcatccgtgctg
tttcccaaacccggaaaagaaggcgtgagcagggaggaagcgaaaaagtggctagatacg
ctggggctgcctgacgcttgccttaagctaaattccgacggcagttactgcgtcgtcata
gacactgggccgctttggacgatgcgagacagcctgccaccaggcggggggaatgatagt
gtttacttcgataacgccagattccaggcttggcaaaccggcttcaatgcccaggaagag
cgcctgaaaaacacattgcagtccttcacgcagaaatactcgaatgccaattcctatcat
gacaatttcagtaaaacgctgtcttcacatttgaatcagttttttgacatgttgaaggcg
atgttgaatttttga
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