Pseudomonas sp. UW4: PputUW4_03623
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Entry
PputUW4_03623 CDS
T02357
Symbol
sipB
Name
(GenBank) invasin
KO
K13285
invasin B
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
PputUW4_03623 (sipB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppuu02000
]
PputUW4_03623 (sipB)
Transporters [BR:
ppuu02000
]
Other transporters
Pores ion channels [TC:
1
]
PputUW4_03623 (sipB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SseC
T3SSipB
TPR_MLP1_2
Sec8_N
DUF2207_C
Motif
Other DBs
NCBI-ProteinID:
AFY20815
LinkDB
All DBs
Position
complement(4209796..4211577)
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AA seq
593 aa
AA seq
DB search
MSEIRSTFNPVSLGLTGRDGAVEKYGKAVSQAAGTVDYQKAGQEALARLMSVSYEGLPGP
SVASAGRPLLHLPALRADGNKQETNLDLFTLLMAMISELIGEVDVKKLKNRLAMLQSMAG
AKQQGYEKLAADYAAAVEALEVAEGNIGSSQEHLDQLQERVRQVQGLLNESEARLAELDS
ESPEYARELALRDKLKGELAGHTQTLQKATDAHLKLIEIANACAKTLAMVAVKVQEAGLA
GPLVKESNEKALNSSALALLNRLKIIELLGEAAQNKEELNQELFQEMQAKLQEHMKLESE
KYLEEVRKAEALQSTMGCIGKIVGAILTLATIVVSVLTLNPVLFVVGVIGAGVMISDLVV
EEVTGKSFMAEAMKPLTTVMQEAIKLLTELYRIGLVTFGIDEKTAKDIAQIAGMIAGIAA
TLAAVAVVSVLGAKVVGLMADAIASRLSSMIANAVPAAIEAFKQVSSSVSNSLTQMLTQL
RSFITRGADAVTLARITAYLQTAQAVTEFGNVVVQGGLQIGSGEHLAKAAKHLADVQVRM
AISEEITDYLTRLVEDYGQAMQVRTDEIGKLIADNDRSHYVSLQMARNVRSHG
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaatcagaagcaccttcaacccggtttctttgggcttgaccggtcgggacggg
gccgttgaaaaatatggcaaggctgtcagtcaagcggccggaacggtggattatcagaag
gccggccaagaggcattggctcgcctgatgtcggtgagctacgaaggcctgcccggccca
tccgtcgccagtgcgggcagacccttgctgcacttgccagctctacgcgctgacggcaac
aaacaggaaaccaacctcgatctgttcacgctgttgatggcgatgatcagcgagttgatc
ggcgaagtcgacgtcaaaaaactgaaaaaccgcctggcgatgctgcaaagcatggccggt
gccaagcagcaggggtatgaaaagctggcggctgactacgccgccgccgtcgaggcgctg
gaagtcgccgaaggcaatatcggcagcagccaggagcacctcgatcagttgcaggagcgg
gttcggcaggtccagggactgctgaatgagagtgaggcacggttggcggagctggattct
gaatcaccggaatacgctcgcgaactggcactgcgcgacaagctgaaaggtgaactggcg
ggccatacccaaacgctgcaaaaggcgaccgatgctcacctgaaactgatcgagatcgcc
aacgcctgcgccaaaacgctggccatggtggccgtgaaggtgcaagaagccggactcgcc
ggacccttggtgaaggagtctaacgaaaaagcgctgaacagcagcgcactggcgctcctg
aaccgcttgaagattatcgagttgcttggcgaggcggcgcagaacaaggaggagctcaac
caggagttgttccaggagatgcaagccaagcttcaggaacacatgaagctcgagtcggaa
aagtacctggaagaagtgcgcaaggccgaggcgctgcagagcaccatgggctgcattggc
aagatcgtcggtgcgatattgacccttgcaaccattgttgtcagcgtgctgaccctcaac
ccggtgctgttcgtggtcggggtgattggcgcgggagtgatgattagcgatttggtggtc
gaggaggtgacgggcaagtcgttcatggccgaagccatgaagccgctgaccacggtcatg
caggaagccatcaagctgttgaccgaactatatagaataggtctggtgacgtttggaatc
gacgagaagaccgcaaaagacattgcgcaaatcgccggcatgatcgcggggatcgcggcc
acgttggctgccgttgcagtggtgtccgtgctcggggcaaaggtggtcgggctaatggcc
gacgccattgcctcgagactgtcctcgatgatcgccaacgctgtgcctgctgccattgag
gcgttcaagcaggtgtcttcatcggtcagcaattcactgacccagatgctgacccagttg
cgcagcttcatcaccagaggcgccgatgcggtgaccctggcccgcattaccgcctatctg
cagacggctcaggccgtcaccgagttcggcaatgtggtagtgcagggcggtttgcagatc
ggtagcggcgaacatctggccaaggcagcgaagcacctggcggacgtgcaggtgcgcatg
gcgatcagcgaagagatcactgactacctcacccggctggtcgaagactacggccaggcg
atgcaggtccgcaccgatgagatcgggaagttaattgccgacaacgatcgcagtcattac
gtgagcctgcaaatggcccggaacgttcgaagccacggataa
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