Pseudomonas sp. UW4: PputUW4_03882
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Entry
PputUW4_03882 CDS
T02357
Name
(GenBank) sigma-54 dependent transcription regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu02020
Two-component system
ppuu02025
Biofilm formation - Pseudomonas aeruginosa
ppuu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PputUW4_03882
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PputUW4_03882
09142 Cell motility
02040 Flagellar assembly
PputUW4_03882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppuu03000
]
PputUW4_03882
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppuu02035
]
PputUW4_03882
Transcription factors [BR:
ppuu03000
]
Prokaryotic type
Helix-turn-helix
Other families
PputUW4_03882
Bacterial motility proteins [BR:
ppuu02035
]
Flagellar system
Flagellar assembly proteins
Others
PputUW4_03882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_7
nSTAND3
AAA_22
bpMoxR
AAA
GAAD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AFY21074
UniProt:
K9NMV6
LinkDB
All DBs
Position
complement(4475619..4477094)
Genome browser
AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSVRRRDLAVILNFLGEENLPCGSHDWQQAVGSLSSSREVICVLIGTV
NAPGTLLGLLKTLSTWDEFLPVLLMGDNSSIDLPEDQRRRVLSTLEMPPSYSKLLDSLHR
AQVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRREAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSVDVRIIAATHKNLESMIEIGTFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVVELPKKFRYVDDEDEQMVDSLRTDLEERVAINGHTQD
FTASAMLPPEGLDLKDYLGGLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRRDGDEQADD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaattctgctgattgatgacgatagcgtccgccgccgcgacctg
gcggtgattttaaattttctcggcgaagaaaatttaccctgcggtagccatgactggcag
caggctgtcggctctttgtcgtcaagtcgtgaagtaatctgtgtcctgatcgggacggtc
aatgctcctggtacacttctgggcttgctaaagacactctcgacctgggatgagttcctt
ccggttttgttaatgggcgataattcttccattgacctgccggaggaccagcgtcgccgg
gtgctttcgaccctcgaaatgccgcccagctacagcaagctgctcgactcgctgcaccgt
gcccaggtctatcgcgagatgtacgaccaggcccgcgagcgcggtcgtcatcgcgaaccc
aaccttttccgcagtcttgtcggcaccagccgggcgatccagcacgtccgccagatgatg
cagcaagtcgccgataccgatgccagcgtgctgatcctcggtgagtccggcaccggcaag
gaagtggttgcgcgcaacctgcattaccattccaagcgccgcgaagcgccgttcgtgccg
gtcaactgcggggcgatcccggccgagttgctggaaagcgaattgttcggtcatgagaag
ggcgccttcaccggggcaatcaccagccgtgccggtcgattcgagctggccaatggcggc
accctgttcctcgatgaaatcggtgacatgccgctgccgatgcaggtcaagctgctgcgc
gtattgcaggagcgcaccttcgagcgagtgggcagcaacaagacccagagcgtcgacgtg
cgcatcattgccgcgacccacaagaatctcgaaagcatgatcgagattggcaccttccgc
gaagacctgtactaccgcctgaatgtgttcccgatcgagatggcgccgctgcgagagcgc
gtcgaggatattccgctgctgatgaacgagctgatctcgcgcatggagcacgagaagcgc
ggttcgatccgtttcaactcggcggcgatcatgtcgctgtgccggcatggctggccgggc
aacgtccgcgaactggccaacctggtggagcgcatggcgatcatgcatccatatggcgtg
atcggcgtggtcgagttgccgaagaaattccgctacgtcgacgatgaagacgagcaaatg
gtcgacagcctgcgcactgatctggaagagcgcgtggccatcaacggccatacccaggac
ttcaccgccagcgccatgttgccgccggagggcctggacctgaaggactacctcggtgga
ctggagcaagggttgattcagcaagcgctggatgatgccaacggcatcgtggcccgcgcg
gccgagcgtctgcgtattcgtcgtaccacgctggtggaaaagatgcgcaagtacggcatg
agtcgtcgtgatggagacgaacaggcggatgattga
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