Pseudomonas sp. UW4: PputUW4_04198
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Entry
PputUW4_04198 CDS
T02357
Name
(GenBank) TetR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
ppuu
Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppuu03000
]
PputUW4_04198
Transcription factors [BR:
ppuu03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PputUW4_04198
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
HTH_22
TetR_C_24
TetR_C_6
COG3_C
HTH_11
TetR_C_41
OSK
HTH_Tnp_1_2
HTH_36
LacI
Motif
Other DBs
NCBI-ProteinID:
AFY21390
LinkDB
All DBs
Position
4831623..4832231
Genome browser
AA seq
202 aa
AA seq
DB search
MTAPQRLTDRKRQAIIQAAIIEFRNNGFEITSMDKIAATAGVSKRTVYNHFPSKEELFAE
ILNQLWIRVTAEQEMAYRPDLPLRDQLRVLLMAKLQMLGDDNFLDLARVAIAATIHSPER
AQDMVARMGEREEGLTVWIRAAQADGRLKTVAPEFAAQQIHGLLKSFAFWPQISMGQPGL
SAEEQNTVADSALDMFLGYYQL
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgacagctccacagcgcctcaccgaccgaaaacgccaagcgatcattcaagccgcgatc
atcgagttccgtaacaacggtttcgagatcaccagcatggacaagattgcggccactgcc
ggtgtgtcgaagcgcacggtgtacaaccactttcccagcaaggaagagttgttcgccgag
atcctcaatcagttatggatccgggtgacggccgaacaggaaatggcctaccgccccgac
ctgccgttgcgcgaccaattgcgcgtattgctgatggccaagctgcaaatgttgggcgat
gacaattttctcgatctggcccgggtggcgatagcggcgaccattcattccccggagcgg
gcgcaggatatggtggcgcgaatgggcgaacgcgaagaggggctgacggtgtggattcgt
gccgctcaggcggatggccgattgaaaaccgtggctcccgagttcgctgcgcaacagatc
catggcctgctcaagtcttttgcattctggccgcagatttccatgggccaacccggcttg
tcagccgaggagcaaaacacggtggcggattccgcgctggacatgttcctgggctattac
cagctctag
DBGET
integrated database retrieval system
