Pseudomonas sp. UW4: PputUW4_04241
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Entry
PputUW4_04241 CDS
T02357
Symbol
fadD1
Name
(GenBank) acyl-CoA synthetase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00061
Fatty acid biosynthesis
ppuu00071
Fatty acid degradation
ppuu01100
Metabolic pathways
ppuu01212
Fatty acid metabolism
ppuu02024
Quorum sensing
Module
ppuu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PputUW4_04241 (fadD1)
00071 Fatty acid degradation
PputUW4_04241 (fadD1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PputUW4_04241 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppuu01004
]
PputUW4_04241 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppuu04147
]
PputUW4_04241 (fadD1)
Enzymes [BR:
ppuu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PputUW4_04241 (fadD1)
Lipid biosynthesis proteins [BR:
ppuu01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
PputUW4_04241 (fadD1)
Exosome [BR:
ppuu04147
]
Exosomal proteins
Exosomal proteins of breast milk
PputUW4_04241 (fadD1)
Exosomal proteins of breast cancer cells
PputUW4_04241 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF599
Motif
Other DBs
NCBI-ProteinID:
AFY21433
UniProt:
K9NQH8
LinkDB
All DBs
Position
complement(4869727..4871427)
Genome browser
AA seq
566 aa
AA seq
DB search
MIEDFWKDKYPAGIAAEINPDEYPNIQAVLKQSCQRFANKPAFSNLGKTLTYGELYELSG
AFAAYLQQHTDLQPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEAVVPKTGVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYH
LPKAVKFNDVLSKGQGQPVAEANPASSDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNEGFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCAICEGYGM
TETSPVATVNPIQNIQIGTIGIPVPSTLCKIINDAGVEQPMGEIGELCVKGPQVMKGYWQ
RQEATDEILDSEGWLKTGDIALIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLATLPG
VLQCAAIGVPDEKSGEAIKIFIVVKPGVTLTKEQVMEHMRANVTGYKVPRSVEFRDALPT
TNVGKILRRELRDEELKKINAKKATA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagacttttggaaggataagtacccagctgggattgctgctgagatcaatcca
gacgagtatccgaatattcaggcagtgttgaagcaatcctgccaacgcttcgccaacaag
ccggcattcagcaacctgggcaagacactcacctacggtgaactgtacgaattgtccggt
gcgtttgccgcttacctgcaacagcataccgatttgcagcctggcgatcgaatcgccgtg
caactgcccaacgtgttgcagtacccggttgccgtcttcggcgccatccgcgccgggctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggagatggaacaccaattcaacgac
tccggtgccaaggccctggtctgcctggccaacatggcgcacctggctgaagccgtggtg
ccgaaaaccggcgtcaagcacgtgatcgtcaccgaagtcgccgacctgctgccgccgctc
aagcgcctgctgatcaacagcgtcatcaagtacgtgaagaagatggtgccggcctatcac
ttgccaaaagccgtcaagttcaacgacgtgctgagcaaaggccagggccagccagtggcc
gaagccaatccggccagcagcgatgtcgcggtgctgcaatacaccggcggcaccaccggt
gtggccaagggcgcgatgctgacccaccgcaacctggtggcgaacatgctgcagtgcaag
gcgctgatgggttccaacctcaatgaaggttgcgagatcctgatcacgccgctgccgctg
taccacatctatgccttcacttttcactgcatggcgatgatgctgatcggcaaccacaac
atcctgatcagtaacccgcgtgacctgccggcgatggtcaaggaactgtcgaagtggaag
ttcagcggcttcgtcggtttgaacacactgttcgtggccttgtgcaataacgaaggcttc
cgcaagctggatttctccgcgctgaaagtcaccttgtcgggcggcatggccctgcaactg
gccgcggccgaacgctggaaggcggtcaccggttgcgccatctgcgaaggctacggcatg
actgaaaccagcccggtggccacggtcaacccgatccagaacatccagatcggcaccatc
ggcattccggtgccgtcaaccctgtgcaaaatcatcaacgatgccggtgtcgaacaaccg
atgggcgaaatcggcgaactgtgcgttaaggggccgcaggtcatgaagggttactggcaa
cgccaggaagccaccgatgaaatcctcgacagcgaaggctggttgaagaccggtgacatc
gcgctgatccagcctgacggctacatgcgcattgtcgatcgcaagaaagacatgatcctg
gtgtccggtttcaacgtgtacccgaacgagctcgaagacgtgctggcgaccctgccgggc
gtgctgcaatgcgcggccatcggtgtgccggacgagaagtcgggcgaagcgataaagatt
ttcatcgtcgtcaagccaggcgtgaccctgaccaaggagcaggtgatggagcacatgcgc
gccaacgtcaccggctacaaagtcccgcgctccgtggagttccgcgatgcactgccgacc
accaacgtcggcaagatcctgcgtcgtgaattgcgcgatgaagagctgaagaagatcaac
gcgaagaaagccaccgcgtaa
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