Pseudomonas sp. UW4: PputUW4_04242
Help
Entry
PputUW4_04242 CDS
T02357
Symbol
fadD2
Name
(GenBank) acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00061
Fatty acid biosynthesis
ppuu00071
Fatty acid degradation
ppuu01100
Metabolic pathways
ppuu01212
Fatty acid metabolism
ppuu02024
Quorum sensing
ppuu04146
Peroxisome
Module
ppuu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PputUW4_04242 (fadD2)
00071 Fatty acid degradation
PputUW4_04242 (fadD2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PputUW4_04242 (fadD2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PputUW4_04242 (fadD2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppuu01004
]
PputUW4_04242 (fadD2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppuu04147
]
PputUW4_04242 (fadD2)
Enzymes [BR:
ppuu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PputUW4_04242 (fadD2)
Lipid biosynthesis proteins [BR:
ppuu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PputUW4_04242 (fadD2)
Exosome [BR:
ppuu04147
]
Exosomal proteins
Exosomal proteins of breast milk
PputUW4_04242 (fadD2)
Exosomal proteins of breast cancer cells
PputUW4_04242 (fadD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AFY21434
LinkDB
All DBs
Position
complement(4871813..4873501)
Genome browser
AA seq
562 aa
AA seq
DB search
MQPDFWNDKRPAGVPLDIDLGAYKSVIEVFERSCKKFADRPAFSNMGVTLTYAELERQSA
AFAGYLQAHTDLVPGDRIAVQMPNVLHYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKD
SGARALVYLNMFGQKVQEVLPDTDIQYLIEAKMGDLMPTAKGWLVNTVVSKVKKMVPDYS
LPQAVSFKSALRMGRGLGIKPLKVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMQQAR
ACLSQSASDGQPLLREGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIAGFI
KELKNWRFSALLGLNTLFVALMDHPDFKTLDFSSLKLTNSGGTALVKATAERWEQLTGCR
ITEGYGLTETSPVACTNPYGEQSRIGTVGLPVPGTTLKVISDDGVEQPLGERGELCIKGP
QIMKGYWQKPEATAEVLDAEGWFKSGDIAVIDPDGFVRIVDRKKDMIIVSGFNVYPNEIE
DVVMAHPNVANCAVIGVPDERSGEAVKLFVVAREAGVSLEELKAYCKENFTAYKVPKHIV
LRESLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgatttctggaatgacaaacgcccggccggcgtccccctggatatcgatctg
ggagcctacaagtcggtgatcgaggtgttcgagcgttcctgcaagaagtttgctgaccgc
cctgcgttcagcaacatgggcgtgaccctgacctacgccgaactggaacgccagagcgct
gccttcgccggctacctgcaagcccacaccgacctggtgccgggtgaccgcatcgcggtg
cagatgcccaacgtcctgcattaccccattgccgttttcggcgccttgcgcgccgggttg
atcgtggtcaacaccaacccgttgtacaccgcgcgggaaatgcgtcaccagttcaaggat
tccggtgcccgggcgctggtgtacttgaacatgttcggccagaaagtccaggaagtgctc
cccgataccgacatccagtacctgatcgaagcgaagatgggcgacctgatgcccaccgcc
aagggttggctggtcaacactgtggtgagcaaggtcaagaagatggttccggactattcc
ttgccccaggccgtctctttcaagagcgcattgcgcatgggccgtggcctgggcatcaag
ccgctgaaggtcggcctcgacgacatcgccgtgctgcaatacaccggtggcaccaccggc
ctggccaagggtgcgatgctgacccacggcaacctggtggcgaacatgcagcaggcacgg
gcctgcctcagtcagtcggccagcgacggtcagccgctgctgcgtgaaggccaggaggtg
atgatcgcaccgctgccgctgtaccacatctatgccttcacagcgaactgcatgtgcatg
atggtgacgggcaaccacaacgtgctgatcaccaacccacgggacatcgccggcttcatc
aaggagctgaagaactggcggttctcggcgctgctggggctcaacacactgttcgttgcg
ctgatggatcacccggatttcaagaccctggacttctccagcctcaagctcaccaactcc
ggcggcactgcgttggtcaaggccaccgccgagcgttgggaacaactgaccggttgccgc
atcaccgaaggttacggcctgaccgaaacctcgccggtggcttgtaccaacccgtatggc
gagcagtcccggatcggcacggtcggcctgccggtgccgggcaccacgctgaaagtcatc
agcgatgacggcgtcgaacaacctttgggtgagcgcggcgagttgtgcatcaagggtccg
cagatcatgaagggctactggcagaaacctgaagccacggccgaagtgctggatgccgag
ggctggttcaagtccggtgacattgcggtgatcgatccggacggtttcgtgcgcatcgtt
gaccgcaagaaggacatgatcattgtctcgggtttcaacgtgtacccgaacgaaatcgaa
gacgtggtgatggctcacccgaacgtcgccaactgtgcggtcatcggtgtgcctgacgaa
cggtcgggggaggcggtgaagctgttcgtggtggcccgtgaagcgggcgtcagccttgaa
gaactgaaggcttactgcaaggagaacttcacggcgtataaagtaccgaagcacatcgtg
ctgcgcgaatcgctgccgatgacgccggtgggcaagatcctgcggcgggagttgcgtgat
atcgcctga
DBGET
integrated database retrieval system
