Pseudomonas sp. UW4: PputUW4_04272
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Entry
PputUW4_04272 CDS
T02357
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PputUW4_04272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppuu03400
]
PputUW4_04272
Enzymes [BR:
ppuu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PputUW4_04272
DNA repair and recombination proteins [BR:
ppuu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PputUW4_04272
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
CobS_N
Motif
Other DBs
NCBI-ProteinID:
AFY21464
LinkDB
All DBs
Position
complement(4906876..4907739)
Genome browser
AA seq
287 aa
AA seq
DB search
MKLLLTYQPPYDWPAMLGFLSARAIAGLETVADGVYSRSIDLKGMHGSFSIRPATSDALE
LRLDFPDPSAVPDIVASVRRMFDLDADLATIHRHLAGDPLMARLIAERPGLRVPGAWDGL
ELAIRAVLGQQITVVAAIRLAGKLVAQYGVPLGKPLAGLSHVFPSAQVLAQADLAALGMP
KSRGRTLSGVAQALLDDPRLFEPGREGGVARLLALHGIGDWTAQYIALRQLREMDGFPNG
DVGLVNALAALEGGPVTAKQLLARAEAWRPYRGYAAQLLWTSLSRVD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctgctgctgacgtatcagccaccctatgactggccggccatgctgggatttttg
tcggctcgggcgattgcaggactggaaacggttgccgacggcgtctactcgcgcagcatc
gatctgaaggggatgcacggcagcttttctatccggcctgccacgtctgacgcccttgag
ctgaggctggactttcccgacccgagcgccgtgcccgacatcgtcgcaagcgtgcggcgg
atgttcgatctcgatgccgacctcgccaccatccatcggcatttagcgggtgatccgctg
atggcccggttgattgccgagcgtcccggactgcgtgtgccgggggcgtgggacgggctg
gaactggcgatccgcgcggtgctggggcagcagattacggtggtcgcggcgattcgcctg
gcggggaaactggtggcgcaatatggcgtgccactgggtaagccgttagcgggtttgagt
catgtgttcccctcggcgcaggtgctggcgcaggccgatctggctgcgttgggcatgccg
aaaagccgagggcggaccttgtcgggtgtggctcaggcattgcttgatgacccgcgattg
ttcgagcccggtcgggaggggggcgtagcgcggttgctggcgttgcacgggattggtgac
tggacggcgcaatacattgcgttgcgccagttgcgggagatggatggatttcccaatggc
gatgtggggctggtcaatgcgttggcggcactggagggtgggccggtgacggcgaagcag
ctgttggcgcgggcggaagcgtggcggccttatcgagggtatgcggcgcagttgctgtgg
acttcgttgagtcgggtggactga
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integrated database retrieval system
