Pseudomonas sp. UW4: PputUW4_04353
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Entry
PputUW4_04353 CDS
T02357
Symbol
potD3
Name
(GenBank) spermidine/putrescine ABC transporter periplasmic protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PputUW4_04353 (potD3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppuu02000
]
PputUW4_04353 (potD3)
Transporters [BR:
ppuu02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PputUW4_04353 (potD3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_11
SBP_bac_1
TAT_signal
UCR_Fe-S_N
Motif
Other DBs
NCBI-ProteinID:
AFY21545
LinkDB
All DBs
Position
complement(4999494..5000597)
Genome browser
AA seq
367 aa
AA seq
DB search
MGEHDLNRRQFIKTVGVASVAAAAMSMPFIKANASDTRFAGKTLRLLTWSDDTGLAALRN
IAATFEDKYGCKVIADRTGSTSEMVAKLKAGGDRPQYDIITLAGVGAEGLAAANLLEKPD
LNRIPNLVDVPEKYRTGANGHGIGYLLWCNSLVYSTRTQKEAPTSYASLWDADAAPNIFL
PPPNWTEAMDLIIIAAKLAGGDEHNIEPGFKKLAELKDRVVTLGENPNQIAELFRTGSLD
MGGLYAPAFFPKQIRDPNYGLGATFGMKEGFYTDLMLSVMPKNRPGDTDMAYAFINHSLD
PLVQGKMAEDIYNGPVNAKAIISAEARKSPYILTPEQIAEKAIMHDNAFLATVHDQWIRR
YTEIFSS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagcatgatctgaacagacgtcaattcatcaagaccgtgggcgtagcctcggtt
gcagcggcagccatgagcatgccgttcatcaaggccaatgccagcgacacacgctttgcc
ggcaagaccctgcgtttgctgacctggtccgatgacaccggcctggctgcactgcgcaac
atcgccgcgacgttcgaagacaagtacggctgcaaggtcatcgctgaccgcaccggcagt
acctcggaaatggtcgccaaactcaaggccggcggtgatcgtccgcagtacgacatcatc
accctggcaggggttggcgccgaaggtctggccgccgccaacctgctggaaaaacccgac
ctcaaccgcattcccaacctggtcgatgtaccggagaaataccgcaccggcgccaatggc
cacggtatcggttacctgctgtggtgcaacagtctggtctacagcacccgcacccagaaa
gaagccccgaccagctacgcctccctgtgggatgccgacgcggcgccgaacatcttcctc
ccgccgccgaactggaccgaggccatggacctgatcatcattgccgccaaactggccggt
ggtgacgagcacaacatcgaacctggcttcaagaaactcgccgagctgaaagatcgtgtg
gtgaccctgggtgaaaacccgaaccagatcgccgagctgttccgcaccggttccctggac
atgggcggcctgtacgcaccggcgttcttcccgaaacagatccgcgatccgaactacggt
ctgggcgcgacctttggcatgaaggaaggtttctacaccgacctgatgctctcggtgatg
ccgaagaaccgtccgggcgataccgacatggcctatgccttcatcaaccactccctggac
ccactggtgcagggcaagatggctgaagacatctacaacggtccggtcaacgccaaggcg
atcatctccgccgaagcgcgcaagagcccgtacatcctcacgccggagcagattgccgag
aaggcgatcatgcacgacaacgccttcctggcgactgtgcatgaccaatggattcgtcgt
tacacggaaatcttttcttcctga
DBGET
integrated database retrieval system
