Pseudomonas sp. UW4: PputUW4_04438
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Entry
PputUW4_04438 CDS
T02357
Symbol
valS
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PputUW4_04438 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppuu01007
]
PputUW4_04438 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppuu03016
]
PputUW4_04438 (valS)
Enzymes [BR:
ppuu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
PputUW4_04438 (valS)
Amino acid related enzymes [BR:
ppuu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
PputUW4_04438 (valS)
Transfer RNA biogenesis [BR:
ppuu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PputUW4_04438 (valS)
Prokaryotic type
PputUW4_04438 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
AFY21630
LinkDB
All DBs
Position
5092645..5095491
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AA seq
948 aa
AA seq
DB search
MDKTYQPHAIETSWYNTWESENYFAPQGAGESYTIMIPPPNVTGSLHMGHGFNNAIMDAL
IRFRRMQGRNTLWQPGTDHAGIATQMLVERQLEAKGQSRHDLGREKFLEKVWEWKDESGG
NISRQIRRLGSSVDWSRERFTMDDGLSEAVKEAFVRLHEDGLIYRGKRLVNWDTKLHTAI
SDLEVENHDEKGFLWNLKYPLADGAKTAEGNDFLIVATTRPETMLGDSAVAVNPNDERYK
ALIGKFVELPLVGRRIPIIADDYCDPEFGTGCVKITPAHDFNDYEVGKRHNLPLLNIFDK
NAAVLPACQVFNLDGTLNETIDGKIPAEYAGLDRFEARKQIVAAFDAAGLLVSVDDHALK
VPKGDRSGTVIEPWLTDQWYVSTKPLAEPAIAAVEDGRIQFVPKQYENMYFSWMRDIQDW
CISRQLWWGHRIPAWYDESGKVYVGRDEAEVRAKHNLGPDIALQQDNDVLDTWFSSGLWT
FSTLGWPEKTEFLKKFHSTDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYV
HGLVRDGQGQKMSKSKGNVLDPLDIIDGIELEALVQKRTSGMMQPKLAKKIEKQTRDEFA
EGIASYGTDALRFTFCSLASTGRDIKFDMGRVEGYRNFCNKIWNAARYVLDKGEDCGQNG
EAYELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW
DENAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRIAPLAGIEGKTIMLQPWPV
ANETRIDQAAEDDIEWLKGLMLGTRNIRGEMNIGPGKPLPLFLKNVSAEDQRRLAENEAL
LKKLARLESITVLTAGEEAPLSATALVGEMEVLVPMAGLIDKGAELARLDKEIQRLQGEV
QRVGGKLSNAGFVDKAPAEVIEKERAKLAEAEQALGKLAEQHARIASL
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggataagacctaccagccgcacgccattgaaacttcctggtacaacacctgggagtca
gagaattacttcgccccgcaaggcgcgggcgagtcctacaccatcatgatcccgccgccg
aacgtcaccggcagcctgcacatgggtcacggcttcaacaacgcgatcatggacgccctg
atccgtttccgccgcatgcagggtcgcaacaccctgtggcagccgggcaccgaccacgcc
ggtatcgccacacagatgctggtcgagcgtcagctcgaagccaagggccagagccgccac
gacctgggccgcgaaaaattcctcgagaaagtctgggaatggaaggatgagtccggtggc
aacatcagccgccagatccgtcgcctcggttcgtccgtcgactggagccgcgagcgcttc
accatggacgacggcctctcggaagctgttaaagaagctttcgtacgcctgcacgaagac
ggcctgatctaccgcggcaaacgcctggtcaactgggacaccaagctgcacacggcgatt
tccgacctcgaagtggaaaaccacgacgagaaaggtttcctgtggaacctgaagtacccg
ctggccgatggcgccaagacggctgaaggcaacgatttcctgatcgtcgcgaccactcgc
ccggaaaccatgctcggcgactccgccgtcgcggtgaacccgaacgacgaacgctacaaa
gccctgatcggtaaatttgtcgagctgccactggttggccgccgcatcccgatcatcgcc
gacgattactgcgaccctgaattcggcaccggctgcgtgaaaatcaccccggcccacgac
ttcaacgactacgaagtcggcaagcgtcacaacctgccgttgctgaacatcttcgacaag
aacgcagcggtcctgccggcttgccaggtgttcaacctcgacggcacgctgaacgaaacc
atcgacggcaagatcccggccgaatacgccggtctcgaccgcttcgaagcacgcaagcag
atcgtggctgcgttcgacgctgccggcctgttggtcagcgttgacgatcacgccctgaaa
gtgccgaaaggcgaccgttccggcaccgtcatcgaaccgtggctgaccgaccagtggtac
gtgtccaccaagcctttggccgaacctgcgatcgccgccgttgaagacggccgcatccag
ttcgtgccgaaacagtacgaaaacatgtatttctcgtggatgcgcgacatccaggactgg
tgcatcagccgtcaactctggtggggccaccgcattccggcctggtacgacgagtcgggc
aaggtctacgtcggtcgcgacgaagccgaagtgcgtgcaaagcacaacctcggcccggac
attgcgctgcaacaggacaacgacgttctcgacacctggttcagctcgggcctgtggacc
ttctccaccctcggctggccggaaaaaaccgaattcctgaagaaattccactccaccgac
gtcctggtgactggcttcgacatcattttcttctgggttgcccggatgatcatgctcacc
atgcatctggtgaaaaacgaagacggcacgccacaggttccgttcaagaccgtttacgtt
cacggcctggtgcgtgacggccaggggcagaagatgtccaagtcgaagggcaacgtcctg
gacccgctggacatcatcgacggtatcgagctcgaagccctggtgcagaagcgcacctcc
ggcatgatgcagccgaaactggcgaagaagatcgagaagcagacccgcgacgagttcgcc
gaaggcatcgccagctacggcaccgacgccctgcgcttcaccttctgctcgctggcgtcc
accggtcgcgacatcaagttcgacatgggccgcgtcgagggctatcgcaacttctgcaac
aagatctggaacgccgcacgttacgtgctggacaagggcgaagactgcggccagaacggc
gaagcctatgagctgtccctggctgaccgctggatcatttcgcagctgcaacgcaccgaa
gccgaagtgacccgccaactcgaccaattccgtttcgacctggcggcacaagcgctgtac
gagttcatctggaaccagtactgcgactggtacctggaactgtccaagcctgtgctgtgg
gacgaaaacgctccggttgaacgccagcgcggcacccgtcgcactctggtgcgcgtactg
gaagtcgccctgcgcctggcgcacccgttcatgccgttcatcaccgaagaaatctggcag
cgcatcgcgccgctggccggcatcgaaggcaagacgatcatgctgcaaccttggccagtg
gccaacgaaacccgcatcgatcaggcggccgaagacgacatcgaatggctcaagggcctg
atgctcggcacccgtaacatccgtggcgaaatgaacatcggcccgggcaaaccgctgccg
ctgttcctgaagaacgtcagcgccgaggatcagcgtcgcctggccgaaaacgaagccctg
ctgaagaagctggcgcgcctcgaatcgatcaccgtgctgactgccggcgaagaagcacca
ctgtccgccaccgcactggtcggcgagatggaagtgctggtgccaatggccggcctgatc
gacaaaggtgcggagctggcgcgtctggacaaggaaatccagcgtctgcaaggtgaagtg
caacgtgtcggcggcaagctgtccaacgccggcttcgtcgacaaggcgccagccgaagtc
atcgagaaagaacgcgccaaactggccgaggctgaacaggccctgggcaagttggccgag
cagcatgcgcggattgccagcctgtaa
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